Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14625

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,144,388	+				-1.5
3,144,388	+				-2.8
3,144,388	+				-2.0
3,144,389	-				-3.1
3,144,389	-				-4.4
3,144,389	-				-2.2
3,144,451	+				-3.4
3,144,451	+				-0.1
3,144,451	+				+0.3
3,144,451	+				-0.5
3,144,451	+				+1.9
3,144,451	+				-1.0
3,144,451	+				-4.2
3,144,451	+				-3.5
3,144,451	+				-2.6
3,144,451	+				+0.4
3,144,452	-				-2.9
3,144,452	-				-3.6
3,144,452	-				-1.3
3,144,452	-				-1.5
3,144,452	-				-0.0
3,144,452	-				-0.6
3,144,521	+				+1.3
3,144,522	-				+0.2
3,144,637	-		RR42_RS14615	0.13	+3.6
3,144,737	-		RR42_RS14615	0.37	-1.4
3,144,737	-		RR42_RS14615	0.37	+0.2
3,144,770	+		RR42_RS14615	0.45	+0.7
3,144,771	-		RR42_RS14615	0.45	-1.8
3,144,771	-		RR42_RS14615	0.45	+1.3
3,144,860	+		RR42_RS14615	0.66	-3.6
3,144,865	+		RR42_RS14615	0.67	+0.6
3,144,865	+		RR42_RS14615	0.67	-0.3
3,144,865	+		RR42_RS14615	0.67	+1.6
3,144,866	-		RR42_RS14615	0.67	+0.1
3,144,866	-		RR42_RS14615	0.67	+1.4
3,144,866	-		RR42_RS14615	0.67	-1.2
3,144,866	-		RR42_RS14615	0.67	-0.6
3,144,891	+		RR42_RS14615	0.73	-2.3
3,145,271	+		RR42_RS14620	0.72	+0.7
3,145,271	+		RR42_RS14620	0.72	-4.0
3,145,271	+		RR42_RS14620	0.72	-1.2
3,145,277	+		RR42_RS14620	0.74	+1.2
3,145,277	+		RR42_RS14620	0.74	-0.2
3,145,278	-		RR42_RS14620	0.74	+1.5
3,145,278	-		RR42_RS14620	0.74	+2.9
3,145,398	+				+0.1
3,145,443	+				-1.3
3,145,443	+				-0.2
3,145,443	+				+1.6
3,145,443	+				+2.0
3,145,444	-				-2.1
3,145,539	+		RR42_RS14625	0.17	-1.6
3,145,605	+		RR42_RS14625	0.24	+1.5
3,146,156	+		RR42_RS14625	0.82	+0.1
3,146,157	-		RR42_RS14625	0.83	+1.2
3,146,411	+				+0.5
3,146,412	-				-0.3
3,146,505	-		RR42_RS14630	0.13	+0.5
3,146,666	+		RR42_RS14630	0.25	-0.5
3,146,666	+		RR42_RS14630	0.25	-3.9
3,146,667	-		RR42_RS14630	0.25	+0.6
3,146,811	+		RR42_RS14630	0.36	+0.4
3,146,812	-		RR42_RS14630	0.36	-1.6
3,146,831	+		RR42_RS14630	0.38	+1.4
3,146,831	+		RR42_RS14630	0.38	+3.4
3,146,831	+		RR42_RS14630	0.38	-1.2
3,146,832	-		RR42_RS14630	0.38	+0.6
3,146,843	+		RR42_RS14630	0.39	-3.2
3,146,844	-		RR42_RS14630	0.39	-0.8
3,146,844	-		RR42_RS14630	0.39	-2.3
3,146,846	+		RR42_RS14630	0.39	+0.7
3,146,847	-		RR42_RS14630	0.39	+0.6
3,146,847	-		RR42_RS14630	0.39	+0.7
3,146,856	+		RR42_RS14630	0.40	-2.0
3,146,856	+		RR42_RS14630	0.40	+0.6
3,146,857	-		RR42_RS14630	0.40	+0.3
3,146,857	-		RR42_RS14630	0.40	+0.7
3,146,857	-		RR42_RS14630	0.40	+2.0
3,146,857	-		RR42_RS14630	0.40	+1.2
3,146,858	+		RR42_RS14630	0.40	+0.0
3,146,859	-		RR42_RS14630	0.40	-2.6
3,146,859	-		RR42_RS14630	0.40	-0.8
3,147,153	-		RR42_RS14630	0.63	+0.8
3,147,153	-		RR42_RS14630	0.63	+0.9
3,147,153	-		RR42_RS14630	0.63	-3.0
3,147,180	-		RR42_RS14630	0.65	-0.1
3,147,287	+		RR42_RS14630	0.73	+1.1
3,147,288	-		RR42_RS14630	0.73	-0.2