Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14550

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,130,182	+				-3.4
3,130,183	-				-1.3
3,130,303	-				+1.4
3,130,320	+				+0.3
3,130,321	-				-0.2
3,130,390	+				+2.6
3,130,390	+				-0.8
3,130,393	-				+0.0
3,130,515	-		RR42_RS14545	0.20	+1.7
3,130,515	-		RR42_RS14545	0.20	+2.7
3,130,515	-		RR42_RS14545	0.20	+0.2
3,130,516	+		RR42_RS14545	0.20	+1.0
3,130,517	-		RR42_RS14545	0.21	-2.3
3,130,532	-		RR42_RS14545	0.24	+0.9
3,130,569	+		RR42_RS14545	0.32	-2.6
3,130,694	+		RR42_RS14545	0.59	+1.0
3,130,695	-		RR42_RS14545	0.59	-2.6
3,130,703	+		RR42_RS14545	0.61	-3.7
3,130,704	-		RR42_RS14545	0.61	+0.5
3,130,732	+		RR42_RS14545	0.67	+0.0
3,130,732	+		RR42_RS14545	0.67	-0.1
3,130,777	+		RR42_RS14545	0.77	-0.4
3,130,778	-		RR42_RS14545	0.77	-3.5
3,130,778	-		RR42_RS14545	0.77	+1.1
3,130,816	-		RR42_RS14545	0.85	-0.4
3,130,820	+		RR42_RS14545	0.86	-0.0
3,130,820	+		RR42_RS14545	0.86	+2.2
3,130,821	-		RR42_RS14545	0.86	-0.7
3,130,821	-		RR42_RS14545	0.86	+2.3
3,130,821	-		RR42_RS14545	0.86	+0.4
3,131,081	+				-0.6
3,131,082	-				+1.2
3,131,082	-				-3.1
3,131,089	+				-4.2
3,131,146	-		RR42_RS14550	0.16	+0.2
3,131,207	-		RR42_RS14550	0.28	-3.3
3,131,465	+		RR42_RS14550	0.80	-1.4
3,131,468	+		RR42_RS14550	0.80	-0.3
3,131,469	-		RR42_RS14550	0.81	+0.4
3,131,537	-				+0.4
3,131,537	-				-3.0
3,131,614	-				-2.9
3,131,630	-				+0.2
3,131,630	-				-3.5
3,131,739	+				-4.2
3,131,739	+				+2.0
3,131,740	-				+2.4
3,131,813	-				+0.2
3,132,523	+		RR42_RS14555	0.31	-4.0
3,132,523	+		RR42_RS14555	0.31	-0.2
3,132,523	+		RR42_RS14555	0.31	-1.3
3,132,524	-		RR42_RS14555	0.31	+1.3
3,132,524	-		RR42_RS14555	0.31	+1.3
3,132,526	+		RR42_RS14555	0.31	-3.6
3,132,527	-		RR42_RS14555	0.31	-2.4
3,132,562	+		RR42_RS14555	0.33	-1.8