Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13450

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,901,262	+		RR42_RS13440	0.89	+0.2
2,901,263	-		RR42_RS13440	0.89	-2.7
2,901,268	+		RR42_RS13440	0.90	+0.6
2,901,269	-		RR42_RS13440	0.90	+1.6
2,901,269	-		RR42_RS13440	0.90	+1.2
2,901,271	+				-3.3
2,901,337	+				-3.2
2,901,337	+				+1.1
2,901,337	+				-0.5
2,901,337	+				+2.7
2,901,338	-				+0.1
2,901,338	-				-1.1
2,901,480	+				-0.1
2,901,480	+				+1.6
2,901,481	-				+0.5
2,901,586	-				+0.7
2,901,586	-				+0.0
2,901,622	+		RR42_RS13445	0.14	-0.9
2,901,622	+		RR42_RS13445	0.14	-1.2
2,901,622	+		RR42_RS13445	0.14	+1.7
2,901,622	+		RR42_RS13445	0.14	-0.4
2,901,622	+		RR42_RS13445	0.14	-1.2
2,901,623	-		RR42_RS13445	0.14	-2.1
2,901,623	-		RR42_RS13445	0.14	+1.7
2,901,849	-		RR42_RS13445	0.46	-0.2
2,901,925	-		RR42_RS13445	0.57	-1.3
2,901,925	-		RR42_RS13445	0.57	-1.4
2,901,925	-		RR42_RS13445	0.57	-1.1
2,901,925	-		RR42_RS13445	0.57	-1.8
2,902,131	+		RR42_RS13445	0.86	-2.7
2,902,254	-				-0.3
2,902,254	-				-4.2
2,902,319	+				+0.5
2,902,319	+				-0.1
2,902,319	+				+0.8
2,902,320	-				+0.1
2,902,320	-				+1.0
2,902,428	+		RR42_RS13450	0.25	+2.2
2,902,428	+		RR42_RS13450	0.25	+1.1
2,902,428	+		RR42_RS13450	0.25	+2.3
2,902,428	+		RR42_RS13450	0.25	-2.3
2,902,429	-		RR42_RS13450	0.25	-4.3
2,902,429	-		RR42_RS13450	0.25	+0.9
2,902,430	+		RR42_RS13450	0.25	-3.5
2,902,430	+		RR42_RS13450	0.25	+0.0
2,902,430	+		RR42_RS13450	0.25	+1.1
2,902,430	+		RR42_RS13450	0.25	-0.7
2,902,431	-		RR42_RS13450	0.25	+4.1
2,902,431	-		RR42_RS13450	0.25	+0.8
2,902,431	-		RR42_RS13450	0.25	-0.6
2,902,431	-		RR42_RS13450	0.25	+1.6
2,902,431	-		RR42_RS13450	0.25	+2.4
2,902,431	-		RR42_RS13450	0.25	-0.7
2,902,976	+				+0.7
2,902,982	+				+1.2
2,902,983	-				-2.3
2,902,987	+				+0.0
2,902,988	-				-2.7
2,903,034	+				+0.5
2,903,034	+				+0.6
2,903,034	+				-4.1
2,903,109	+		RR42_RS13455	0.12	+0.9
2,903,109	+		RR42_RS13455	0.12	+1.3
2,903,109	+		RR42_RS13455	0.12	+1.6
2,903,114	-		RR42_RS13455	0.13	-1.4
2,903,115	+		RR42_RS13455	0.13	-1.2
2,903,115	+		RR42_RS13455	0.13	+1.6
2,903,178	+		RR42_RS13455	0.21	-0.8
2,903,607	+		RR42_RS13455	0.75	-0.7
2,903,607	+		RR42_RS13455	0.75	-1.6
2,903,607	+		RR42_RS13455	0.75	-2.0
2,903,730	+				-2.3
2,903,730	+				-0.6
2,903,731	-				+1.7