Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13380

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,885,229	+		RR42_RS13375	0.12	+1.6
2,885,230	-		RR42_RS13375	0.13	+0.7
2,885,230	-		RR42_RS13375	0.13	+1.3
2,885,232	+		RR42_RS13375	0.13	+0.7
2,885,233	-		RR42_RS13375	0.13	+1.0
2,885,480	-		RR42_RS13375	0.35	+1.2
2,885,480	-		RR42_RS13375	0.35	+0.7
2,885,500	+		RR42_RS13375	0.37	-0.3
2,885,611	+		RR42_RS13375	0.46	+1.6
2,885,611	+		RR42_RS13375	0.46	+1.2
2,885,768	-		RR42_RS13375	0.60	-3.3
2,885,768	-		RR42_RS13375	0.60	+1.7
2,885,875	+		RR42_RS13375	0.70	-1.0
2,885,936	+		RR42_RS13375	0.75	+1.0
2,885,996	-		RR42_RS13375	0.80	+3.1
2,885,996	-		RR42_RS13375	0.80	+0.8
2,885,996	-		RR42_RS13375	0.80	-1.9
2,886,016	+		RR42_RS13375	0.82	+0.0
2,886,031	+		RR42_RS13375	0.84	+0.8
2,886,032	-		RR42_RS13375	0.84	+2.8
2,886,259	-				-1.1
2,886,310	-				+0.1
2,886,333	+		RR42_RS13380	0.11	+2.0
2,886,537	+		RR42_RS13380	0.31	-3.1
2,886,537	+		RR42_RS13380	0.31	+1.3
2,886,538	-		RR42_RS13380	0.31	+1.5
2,886,581	-		RR42_RS13380	0.35	+0.2
2,886,642	+		RR42_RS13380	0.41	-2.8
2,886,643	-		RR42_RS13380	0.41	+1.2
2,886,780	+		RR42_RS13380	0.54	-0.3
2,886,958	-		RR42_RS13380	0.71	+0.7
2,887,006	-		RR42_RS13380	0.75	+0.7
2,887,006	-		RR42_RS13380	0.75	+0.0
2,887,036	-		RR42_RS13380	0.78	-4.1
2,887,036	-		RR42_RS13380	0.78	+0.8
2,887,204	+				+0.9
2,887,205	-				+0.8
2,887,205	-				+3.5
2,887,348	-				+0.7
2,887,350	+				-1.8
2,887,351	-				-0.0
2,887,351	-				-1.8
2,887,354	-				+0.1
2,887,414	-				+2.5
2,887,431	+				+2.5
2,887,431	+				+2.4
2,887,431	+				+1.1
2,887,431	+				+1.2
2,887,492	+		RR42_RS13385	0.11	+1.2
2,887,744	-		RR42_RS13385	0.25	+0.4
2,887,938	-		RR42_RS13385	0.35	+1.5
2,888,047	+		RR42_RS13385	0.41	+2.3
2,888,158	+		RR42_RS13385	0.47	-1.4
2,888,247	+		RR42_RS13385	0.51	+1.0
2,888,248	-		RR42_RS13385	0.51	+2.0
2,888,248	-		RR42_RS13385	0.51	-0.3
2,888,248	-		RR42_RS13385	0.51	-3.1
2,888,255	-		RR42_RS13385	0.52	+3.8