Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13205

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,843,664	+				+0.7
2,843,664	+				-1.9
2,843,664	+				+1.5
2,843,664	+				+0.5
2,843,812	-		RR42_RS13200	0.20	+0.9
2,843,812	-		RR42_RS13200	0.20	-0.4
2,843,923	+		RR42_RS13200	0.35	-0.1
2,843,965	+		RR42_RS13200	0.40	+0.5
2,843,968	-		RR42_RS13200	0.41	+0.4
2,844,099	+		RR42_RS13200	0.58	-2.5
2,844,100	-		RR42_RS13200	0.58	-0.1
2,844,100	-		RR42_RS13200	0.58	+1.2
2,844,104	+		RR42_RS13200	0.59	-2.1
2,844,104	+		RR42_RS13200	0.59	-1.5
2,844,104	+		RR42_RS13200	0.59	+0.8
2,844,104	+		RR42_RS13200	0.59	-0.8
2,844,104	+		RR42_RS13200	0.59	+0.3
2,844,104	+		RR42_RS13200	0.59	-0.7
2,844,104	+		RR42_RS13200	0.59	+1.1
2,844,104	+		RR42_RS13200	0.59	-0.4
2,844,105	-		RR42_RS13200	0.59	-0.7
2,844,105	-		RR42_RS13200	0.59	+1.5
2,844,188	-		RR42_RS13200	0.70	+1.7
2,844,188	-		RR42_RS13200	0.70	-0.4
2,844,255	+		RR42_RS13200	0.79	+1.1
2,844,255	+		RR42_RS13200	0.79	+1.8
2,844,255	+		RR42_RS13200	0.79	-0.9
2,844,255	+		RR42_RS13200	0.79	-2.5
2,844,255	+		RR42_RS13200	0.79	+1.8
2,844,255	+		RR42_RS13200	0.79	-0.3
2,844,255	+		RR42_RS13200	0.79	+0.5
2,844,255	+		RR42_RS13200	0.79	+1.2
2,844,256	-		RR42_RS13200	0.79	-1.1
2,844,256	-		RR42_RS13200	0.79	-1.8
2,844,256	-		RR42_RS13200	0.79	+0.5
2,844,256	-		RR42_RS13200	0.79	+1.2
2,844,256	-		RR42_RS13200	0.79	-1.6
2,844,256	-		RR42_RS13200	0.79	-0.8
2,844,256	-		RR42_RS13200	0.79	+3.1
2,844,384	+				+1.9
2,844,409	+				-1.2
2,844,409	+				-1.5
2,844,409	+				-0.9
2,844,410	-				-1.5
2,844,410	-				-0.3
2,844,410	-				+0.7
2,844,410	-				+1.2
2,844,428	-				+2.4
2,844,487	-				-2.1
2,844,633	+				+4.9
2,844,634	-				-0.3
2,844,634	-				+2.8
2,844,634	-				-0.6
2,844,634	-				+0.2
2,844,634	-				+1.5
2,844,634	-				+0.4
2,844,659	+				-0.3
2,844,799	+		RR42_RS13205	0.15	-3.0
2,844,910	+		RR42_RS13205	0.27	+0.2
2,844,911	-		RR42_RS13205	0.27	+1.1
2,844,911	-		RR42_RS13205	0.27	+0.7
2,845,018	+		RR42_RS13205	0.38	+1.1
2,845,018	+		RR42_RS13205	0.38	-3.0
2,845,018	+		RR42_RS13205	0.38	+0.4
2,845,019	-		RR42_RS13205	0.38	+1.7
2,845,219	+		RR42_RS13205	0.58	+2.3
2,845,220	-		RR42_RS13205	0.59	+1.0
2,845,220	-		RR42_RS13205	0.59	+0.8
2,845,220	-		RR42_RS13205	0.59	-2.4
2,845,220	-		RR42_RS13205	0.59	+0.3
2,845,220	-		RR42_RS13205	0.59	+1.3
2,845,285	+		RR42_RS13205	0.65	-1.9
2,845,285	+		RR42_RS13205	0.65	+0.8
2,845,285	+		RR42_RS13205	0.65	-1.3
2,845,285	+		RR42_RS13205	0.65	+2.0
2,845,285	+		RR42_RS13205	0.65	-2.3
2,845,285	+		RR42_RS13205	0.65	+1.3
2,845,285	+		RR42_RS13205	0.65	+0.9
2,845,285	+		RR42_RS13205	0.65	-0.3
2,845,285	+		RR42_RS13205	0.65	+1.3
2,845,286	-		RR42_RS13205	0.65	-0.8
2,845,306	+		RR42_RS13205	0.67	+0.1
2,845,306	+		RR42_RS13205	0.67	-0.4
2,845,306	+		RR42_RS13205	0.67	+2.2
2,845,306	+		RR42_RS13205	0.67	+2.2
2,845,307	-		RR42_RS13205	0.67	+0.0
2,845,348	+		RR42_RS13205	0.72	+1.1
2,845,530	+				+0.5
2,845,530	+				+1.6
2,845,530	+				-1.1
2,845,531	-				-1.4
2,845,531	-				+1.6
2,845,782	-				-0.2
2,845,850	+		RR42_RS13210	0.11	-0.4
2,845,850	+		RR42_RS13210	0.11	-1.8
2,845,850	+		RR42_RS13210	0.11	-1.6
2,845,851	-		RR42_RS13210	0.11	+1.7
2,845,953	-		RR42_RS13210	0.21	+1.7
2,845,998	-		RR42_RS13210	0.25	+0.7
2,845,998	-		RR42_RS13210	0.25	-2.6
2,845,998	-		RR42_RS13210	0.25	-0.4
2,845,998	-		RR42_RS13210	0.25	-1.7
2,845,998	-		RR42_RS13210	0.25	-1.1
2,846,001	+		RR42_RS13210	0.25	-0.3
2,846,001	+		RR42_RS13210	0.25	+0.1
2,846,001	+		RR42_RS13210	0.25	-1.3
2,846,002	-		RR42_RS13210	0.25	+0.7
2,846,002	-		RR42_RS13210	0.25	-1.7
2,846,045	+		RR42_RS13210	0.30	+0.9
2,846,063	+		RR42_RS13210	0.31	+2.4
2,846,087	+		RR42_RS13210	0.34	+0.7
2,846,088	-		RR42_RS13210	0.34	-0.6
2,846,204	+		RR42_RS13210	0.45	+0.8
2,846,205	-		RR42_RS13210	0.45	+0.8
2,846,205	-		RR42_RS13210	0.45	-2.1
2,846,222	+		RR42_RS13210	0.46	+1.7
2,846,223	-		RR42_RS13210	0.46	+1.1
2,846,223	-		RR42_RS13210	0.46	-3.0
2,846,384	+		RR42_RS13210	0.62	+1.9
2,846,385	-		RR42_RS13210	0.62	+0.5
2,846,429	+		RR42_RS13210	0.66	-2.5
2,846,429	+		RR42_RS13210	0.66	-1.8
2,846,430	-		RR42_RS13210	0.66	+3.8
2,846,430	-		RR42_RS13210	0.66	-2.5
2,846,430	-		RR42_RS13210	0.66	-2.1
2,846,430	-		RR42_RS13210	0.66	+1.1
2,846,430	-		RR42_RS13210	0.66	+1.2
2,846,455	+		RR42_RS13210	0.68	+1.5
2,846,455	+		RR42_RS13210	0.68	-1.9
2,846,468	+		RR42_RS13210	0.69	+0.0
2,846,468	+		RR42_RS13210	0.69	+0.7
2,846,469	-		RR42_RS13210	0.70	+2.1