Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12440

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,672,370	+		RR42_RS12435	0.69	+1.6
2,672,370	+		RR42_RS12435	0.69	-1.4
2,672,371	-		RR42_RS12435	0.69	-1.6
2,672,371	-		RR42_RS12435	0.69	-2.4
2,672,371	-		RR42_RS12435	0.69	-2.0
2,672,435	+		RR42_RS12435	0.71	-2.9
2,672,435	+		RR42_RS12435	0.71	+0.1
2,672,435	+		RR42_RS12435	0.71	-0.2
2,672,436	-		RR42_RS12435	0.71	+1.0
2,672,479	-		RR42_RS12435	0.73	-2.8
2,672,487	+		RR42_RS12435	0.73	-4.3
2,672,488	-		RR42_RS12435	0.73	+0.1
2,672,488	-		RR42_RS12435	0.73	+1.1
2,672,514	+		RR42_RS12435	0.74	-2.5
2,672,515	-		RR42_RS12435	0.74	+0.4
2,672,601	+		RR42_RS12435	0.77	-2.5
2,672,601	+		RR42_RS12435	0.77	-1.5
2,672,601	+		RR42_RS12435	0.77	+0.5
2,672,601	+		RR42_RS12435	0.77	-0.6
2,672,601	+		RR42_RS12435	0.77	+0.8
2,672,601	+		RR42_RS12435	0.77	+1.2
2,672,601	+		RR42_RS12435	0.77	-0.1
2,672,602	-		RR42_RS12435	0.77	-3.5
2,672,602	-		RR42_RS12435	0.77	+0.7
2,672,602	-		RR42_RS12435	0.77	+1.1
2,672,602	-		RR42_RS12435	0.77	-2.0
2,672,602	-		RR42_RS12435	0.77	-2.6
2,672,602	-		RR42_RS12435	0.77	+1.2
2,672,602	-		RR42_RS12435	0.77	+0.0
2,672,739	+		RR42_RS12435	0.82	+1.9
2,672,766	+		RR42_RS12435	0.83	-0.1
2,672,767	-		RR42_RS12435	0.83	+0.1
2,672,767	-		RR42_RS12435	0.83	-2.7
2,672,901	+		RR42_RS12435	0.88	+0.3
2,672,902	-		RR42_RS12435	0.88	+1.3
2,672,916	+		RR42_RS12435	0.89	+2.1
2,673,100	-				+0.7
2,673,632	-		RR42_RS12440	0.33	-2.2
2,673,632	-		RR42_RS12440	0.33	-2.0
2,673,632	-		RR42_RS12440	0.33	+0.3
2,673,632	-		RR42_RS12440	0.33	-0.9
2,673,632	-		RR42_RS12440	0.33	+0.8
2,673,669	+		RR42_RS12440	0.37	+1.0
2,673,821	-		RR42_RS12440	0.55	+1.3
2,674,024	+		RR42_RS12440	0.78	+0.4
2,674,024	+		RR42_RS12440	0.78	+0.3
2,674,025	-		RR42_RS12440	0.78	-0.1
2,674,164	+				-3.0
2,674,164	+				+2.1
2,674,164	+				+0.5
2,674,165	-				-1.8
2,674,271	+				-0.7
2,674,271	+				-1.8
2,674,272	-				+2.9
2,674,272	-				+1.1
2,674,309	+				-3.0
2,674,310	-				+1.1
2,674,310	-				-1.3
2,674,439	+				-1.5
2,674,453	+				+0.5
2,674,454	-				+1.8
2,674,557	-				+1.2
2,674,689	-				+1.8
2,674,689	-				+0.6
2,674,739	-				-1.5
2,675,210	-				+0.4