Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12360

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,650,757	-		RR42_RS12355	0.17	-2.2
2,650,769	+		RR42_RS12355	0.18	-0.0
2,650,818	+		RR42_RS12355	0.23	-3.8
2,650,819	-		RR42_RS12355	0.24	-0.5
2,650,830	-		RR42_RS12355	0.25	-1.8
2,650,897	+		RR42_RS12355	0.32	+0.3
2,650,898	-		RR42_RS12355	0.32	+1.4
2,650,898	-		RR42_RS12355	0.32	-1.6
2,651,076	-		RR42_RS12355	0.52	-0.6
2,651,076	-		RR42_RS12355	0.52	+0.3
2,651,205	+		RR42_RS12355	0.66	-0.7
2,651,206	-		RR42_RS12355	0.66	+0.9
2,651,221	+		RR42_RS12355	0.68	-3.0
2,651,347	+		RR42_RS12355	0.82	+0.7
2,651,347	+		RR42_RS12355	0.82	-1.3
2,651,347	+		RR42_RS12355	0.82	-2.0
2,651,347	+		RR42_RS12355	0.82	-1.4
2,651,348	-		RR42_RS12355	0.82	-3.0
2,651,349	+		RR42_RS12355	0.82	+1.1
2,651,349	+		RR42_RS12355	0.82	-0.2
2,651,415	+		RR42_RS12355	0.90	+0.7
2,651,541	+				-1.1
2,651,542	-				-0.3
2,651,543	+				+0.2
2,651,544	-				-0.6
2,651,570	+				+0.3
2,651,579	-				+0.4
2,651,587	+				-1.1
2,651,601	+				+0.3
2,651,874	+		RR42_RS12360	0.20	+0.1
2,651,961	+		RR42_RS12360	0.28	+0.6
2,652,000	+		RR42_RS12360	0.32	-0.2
2,652,000	+		RR42_RS12360	0.32	+0.7
2,652,000	+		RR42_RS12360	0.32	-1.5
2,652,001	-		RR42_RS12360	0.32	-0.1
2,652,009	+				-0.3
2,652,009	+		RR42_RS12360	0.33	-1.3
2,652,010	-		RR42_RS12360	0.33	-4.1
2,652,024	+		RR42_RS12360	0.35	-0.0
2,652,024	+		RR42_RS12360	0.35	-0.8
2,652,025	-		RR42_RS12360	0.35	-1.3
2,652,025	-		RR42_RS12360	0.35	+0.5
2,652,080	-		RR42_RS12360	0.40	+2.6
2,652,089	-		RR42_RS12360	0.41	-0.5
2,652,249	+		RR42_RS12360	0.57	-3.1
2,652,436	-		RR42_RS12360	0.76	+1.6
2,652,692	+				-1.3
2,652,692	+				+1.6
2,652,833	+				+1.7
2,652,833	+				-0.4
2,652,834	-				-0.0
2,652,834	-				+0.8
2,652,866	+				+0.8
2,652,866	+				+1.8
2,652,866	+				-0.5
2,652,866	+				-0.2
2,652,867	-				+0.2
2,653,052	+		RR42_RS12365	0.23	+0.3
2,653,052	+		RR42_RS12365	0.23	+0.9
2,653,053	-		RR42_RS12365	0.23	-3.4
2,653,085	+		RR42_RS12365	0.26	-2.9
2,653,095	+		RR42_RS12365	0.27	+3.4
2,653,096	-		RR42_RS12365	0.27	+0.7
2,653,154	+		RR42_RS12365	0.31	+0.3
2,653,154	+		RR42_RS12365	0.31	-4.9
2,653,154	+		RR42_RS12365	0.31	+1.7
2,653,155	-		RR42_RS12365	0.31	-0.9
2,653,155	-		RR42_RS12365	0.31	-1.1
2,653,155	-		RR42_RS12365	0.31	+0.4
2,653,197	-		RR42_RS12365	0.35	-0.3
2,653,208	+		RR42_RS12365	0.35	-3.2
2,653,213	+		RR42_RS12365	0.36	-1.2
2,653,233	-		RR42_RS12365	0.37	+1.1
2,653,292	+		RR42_RS12365	0.42	+1.4
2,653,292	+		RR42_RS12365	0.42	+1.0
2,653,292	+		RR42_RS12365	0.42	-2.9
2,653,292	+		RR42_RS12365	0.42	-2.6
2,653,293	-		RR42_RS12365	0.42	-0.9
2,653,334	+		RR42_RS12365	0.45	+0.6
2,653,400	-		RR42_RS12365	0.50	-4.1
2,653,576	+		RR42_RS12365	0.64	+0.1