Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12230

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,628,596	+				-2.7
2,628,596	+				+0.2
2,628,597	-				-0.8
2,628,597	-				-1.0
2,628,597	-				+0.6
2,628,597	-				-2.3
2,628,597	-				+1.5
2,628,602	-				-0.5
2,628,653	-				-4.3
2,628,653	-				+0.7
2,628,658	+				+1.5
2,628,658	+				-1.7
2,628,659	-				+1.0
2,628,659	-				-1.7
2,628,868	+		RR42_RS12225	0.28	-0.4
2,628,868	+		RR42_RS12225	0.28	-0.2
2,628,868	+		RR42_RS12225	0.28	+1.2
2,628,868	+		RR42_RS12225	0.28	-1.7
2,628,868	+		RR42_RS12225	0.28	+1.2
2,628,869	-		RR42_RS12225	0.28	-2.2
2,628,889	+		RR42_RS12225	0.31	-0.0
2,628,889	+		RR42_RS12225	0.31	+1.7
2,628,890	-		RR42_RS12225	0.31	-1.5
2,628,890	-		RR42_RS12225	0.31	-1.7
2,628,890	-		RR42_RS12225	0.31	+2.2
2,628,944	+		RR42_RS12225	0.37	+0.9
2,628,945	-		RR42_RS12225	0.38	-2.8
2,628,956	-		RR42_RS12225	0.39	+1.1
2,628,956	-		RR42_RS12225	0.39	+0.7
2,629,162	+		RR42_RS12225	0.64	-2.7
2,629,208	-		RR42_RS12225	0.69	+1.2
2,629,475	+				-0.4
2,629,476	-				-1.5
2,629,476	-				+1.0
2,629,501	+				+1.0
2,629,502	-				+1.8
2,629,502	-				+1.5
2,629,992	-		RR42_RS12230	0.38	+0.5
2,630,033	+		RR42_RS12230	0.41	-0.3
2,630,033	+		RR42_RS12230	0.41	+1.5
2,630,034	-		RR42_RS12230	0.41	-1.8
2,630,330	+		RR42_RS12230	0.66	-0.5
2,630,331	-		RR42_RS12230	0.66	+1.0
2,630,331	-		RR42_RS12230	0.66	-2.8
2,630,331	-		RR42_RS12230	0.66	+0.6
2,630,331	-		RR42_RS12230	0.66	-1.5
2,630,363	-		RR42_RS12230	0.69	+1.9
2,630,579	+		RR42_RS12230	0.87	-0.7
2,630,622	-				-1.8
2,630,657	-				-2.7
2,630,733	+				-2.9
2,630,733	+				+0.3
2,630,734	-				+0.3
2,630,773	+				+2.2
2,630,778	+				+1.7
2,630,778	+				-0.1
2,630,821	+				+1.7
2,630,822	-				-2.0
2,630,822	-				+0.5
2,630,823	+				+0.6
2,630,907	-		RR42_RS12235	0.15	+0.3
2,630,907	-		RR42_RS12235	0.15	-3.1
2,631,067	+		RR42_RS12235	0.59	+1.6
2,631,083	+		RR42_RS12235	0.63	+2.0
2,631,171	-		RR42_RS12235	0.87	+2.0
2,631,319	+		RR42_RS12240	0.51	-2.0
2,631,320	-		RR42_RS12240	0.52	-2.0
2,631,484	+				-2.4
2,631,492	+				-0.1
2,631,518	+				-3.2