Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12065
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,586,176 | + | +2.3 | |||
2,586,176 | + | -2.3 | |||
2,586,177 | - | +2.2 | |||
2,586,177 | - | -0.3 | |||
2,586,340 | + | RR42_RS12065 | 0.33 | -1.1 | |
2,586,415 | + | RR42_RS12065 | 0.61 | +1.0 | |
2,586,415 | + | RR42_RS12065 | 0.61 | +2.0 | |
2,586,475 | + | RR42_RS12065 | 0.83 | +2.1 | |
2,586,476 | - | RR42_RS12065 | 0.84 | +0.7 | |
2,586,817 | + | RR42_RS12070 | 0.17 | +1.1 | |
2,586,910 | + | RR42_RS12070 | 0.23 | -3.4 | |
2,587,085 | + | RR42_RS12070 | 0.35 | +0.1 | |
2,587,085 | + | RR42_RS12070 | 0.35 | +1.2 | |
2,587,085 | + | RR42_RS12070 | 0.35 | +1.4 | |
2,587,088 | - | RR42_RS12070 | 0.35 | -3.0 | |
2,587,088 | - | RR42_RS12070 | 0.35 | -0.1 | |
2,587,108 | + | RR42_RS12070 | 0.37 | -2.6 | |
2,587,108 | + | RR42_RS12070 | 0.37 | +1.0 | |
2,587,124 | - | RR42_RS12070 | 0.38 | +2.2 | |
2,587,195 | + | RR42_RS12070 | 0.43 | -3.2 |
Or see this region's nucleotide sequence