Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11995

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,569,131	+		RR42_RS11990	0.43	+1.0
2,569,131	+		RR42_RS11990	0.43	-2.2
2,569,132	-		RR42_RS11990	0.44	+1.5
2,569,482	+		RR42_RS11990	0.66	-0.6
2,569,740	+		RR42_RS11990	0.83	-2.8
2,569,740	+		RR42_RS11990	0.83	-3.0
2,569,741	-		RR42_RS11990	0.83	+1.4
2,569,767	+		RR42_RS11990	0.85	+2.2
2,569,767	+		RR42_RS11990	0.85	-2.2
2,569,768	-		RR42_RS11990	0.85	+0.6
2,569,899	+				+1.1
2,569,900	-				-0.3
2,570,291	+		RR42_RS11995	0.14	+0.3
2,570,291	+		RR42_RS11995	0.14	-1.7
2,570,291	+		RR42_RS11995	0.14	-0.8
2,570,292	-		RR42_RS11995	0.14	+0.3
2,570,334	+		RR42_RS11995	0.16	+0.0
2,570,335	-		RR42_RS11995	0.16	-0.1
2,570,862	-		RR42_RS11995	0.44	+0.9
2,571,114	-		RR42_RS11995	0.57	+1.4
2,571,176	+		RR42_RS11995	0.61	+1.5
2,571,177	-		RR42_RS11995	0.61	+0.1
2,571,177	-		RR42_RS11995	0.61	+0.4
2,571,545	-		RR42_RS11995	0.80	+2.3
2,571,930	+				-1.1
2,571,931	-				-3.7
2,571,938	-				-1.2
2,571,938	-				-0.2
2,571,938	-				+1.4
2,572,011	+				+0.1
2,572,032	-				+0.3
2,572,077	-				-0.6
2,572,077	-				-2.9
2,572,211	+		RR42_RS12000	0.20	+1.5
2,572,236	-		RR42_RS12000	0.22	-3.2
2,572,547	+		RR42_RS12000	0.55	-0.9
2,572,548	-		RR42_RS12000	0.55	+1.5
2,572,548	-		RR42_RS12000	0.55	-0.1
2,572,548	-		RR42_RS12000	0.55	-2.3
2,572,551	-		RR42_RS12000	0.55	-0.6
2,572,739	+		RR42_RS12000	0.75	-0.6
2,572,740	-		RR42_RS12000	0.75	-1.2
2,572,740	-		RR42_RS12000	0.75	-2.4
2,572,740	-		RR42_RS12000	0.75	-0.5
2,572,740	-		RR42_RS12000	0.75	-2.5
2,572,740	-		RR42_RS12000	0.75	-2.6
2,572,896	-				-0.8