Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10310
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,204,603 | + | +0.7 | |||
2,204,603 | + | +1.5 | |||
2,204,683 | - | -0.6 | |||
2,204,693 | - | -3.3 | |||
2,204,759 | + | -0.8 | |||
2,204,866 | - | -0.7 | |||
2,204,906 | - | -2.0 | |||
2,204,932 | + | +1.3 | |||
2,204,963 | + | +0.7 | |||
2,204,969 | + | +1.2 | |||
2,204,970 | - | -2.7 | |||
2,204,976 | - | +1.1 | |||
2,204,993 | + | +0.5 | |||
2,204,993 | + | +2.6 | |||
2,205,020 | + | +0.6 | |||
2,205,026 | + | +0.8 | |||
2,205,445 | + | +1.7 | |||
2,205,776 | - | RR42_RS10310 | 0.29 | -3.4 | |
2,205,776 | - | RR42_RS10310 | 0.29 | +0.4 | |
2,206,539 | + | RR42_RS10315 | 0.17 | +0.7 | |
2,206,539 | + | RR42_RS10315 | 0.17 | -0.6 | |
2,206,548 | + | RR42_RS10315 | 0.18 | +1.6 | |
2,206,696 | + | RR42_RS10315 | 0.38 | +0.6 | |
2,206,696 | + | RR42_RS10315 | 0.38 | -2.5 | |
2,206,696 | + | RR42_RS10315 | 0.38 | +0.7 | |
2,206,729 | - | RR42_RS10315 | 0.42 | +0.2 | |
2,206,935 | - | RR42_RS10315 | 0.69 | +2.4 | |
2,207,081 | - | RR42_RS10315 | 0.88 | +2.3 | |
2,207,185 | + | -1.4 | |||
2,207,186 | - | -3.8 | |||
2,207,186 | - | -2.2 | |||
2,207,218 | - | +0.6 |
Or see this region's nucleotide sequence