Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10135

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,171,328	+				+1.7
2,171,370	+				+0.2
2,171,371	-				-3.0
2,171,389	+				+1.2
2,171,409	-				-2.1
2,171,409	-				+1.3
2,171,411	+				-0.1
2,171,412	-				+0.5
2,171,412	-				-1.1
2,171,414	+				+0.6
2,171,415	-				+0.4
2,171,457	+				+0.3
2,171,458	-				+1.3
2,171,458	-				-3.2
2,171,524	+				-0.4
2,171,551	+				+1.7
2,171,552	-				-0.8
2,171,552	-				-2.6
2,171,686	-				-1.3
2,171,686	-				-0.2
2,171,686	-				+0.9
2,171,686	-				+0.4
2,171,695	+				+2.5
2,171,696	-				-4.8
2,171,696	-				+1.2
2,171,959	+				+0.7
2,171,959	+				-1.1
2,171,959	+				+0.1
2,171,959	+				+1.4
2,171,960	-				+0.8
2,171,960	-				-0.3
2,172,135	+				-0.4
2,172,135	+				+3.4
2,172,135	+				+2.8
2,172,136	-				-1.4
2,172,136	-				-0.3
2,172,238	+				-1.8
2,172,248	+				+0.3
2,172,249	-				-2.8
2,172,269	+				+1.9
2,172,270	-				-1.0
2,172,307	-				-0.3
2,172,307	-				+1.2
2,172,307	-				+1.4
2,172,307	-				+2.5
2,172,318	-				-3.4
2,172,332	-				+0.7
2,172,376	-				-1.3
2,172,376	-				-2.7
2,172,567	+		RR42_RS10135	0.22	+0.6
2,172,567	+		RR42_RS10135	0.22	-0.8
2,172,567	+		RR42_RS10135	0.22	+0.4
2,172,567	+		RR42_RS10135	0.22	+0.0
2,172,568	-		RR42_RS10135	0.22	+1.5
2,172,568	-		RR42_RS10135	0.22	+0.5
2,172,568	-		RR42_RS10135	0.22	+1.8
2,172,631	+		RR42_RS10135	0.27	-2.3
2,172,631	+		RR42_RS10135	0.27	-0.6
2,172,632	-		RR42_RS10135	0.27	+1.1
2,172,632	-		RR42_RS10135	0.27	+0.1
2,172,736	+		RR42_RS10135	0.35	-1.5
2,172,736	+		RR42_RS10135	0.35	+0.0
2,172,736	+		RR42_RS10135	0.35	+1.0
2,172,737	-		RR42_RS10135	0.35	+1.1
2,172,737	-		RR42_RS10135	0.35	-3.7
2,172,737	-		RR42_RS10135	0.35	-3.5
2,172,737	-		RR42_RS10135	0.35	-2.6
2,172,737	-		RR42_RS10135	0.35	-0.3
2,172,737	-		RR42_RS10135	0.35	+0.6
2,172,737	-		RR42_RS10135	0.35	+1.2
2,172,737	-		RR42_RS10135	0.35	+0.4
2,172,975	+		RR42_RS10135	0.54	+0.1
2,173,264	-		RR42_RS10135	0.76	+0.3
2,173,264	-		RR42_RS10135	0.76	-0.4
2,173,674	-				+1.5
2,173,674	-				-1.2
2,173,674	-				+0.4
2,173,818	-		RR42_RS10140	0.16	+0.2
2,173,834	+		RR42_RS10140	0.18	-1.0
2,173,834	+		RR42_RS10140	0.18	-2.2
2,173,840	+		RR42_RS10140	0.18	-2.0
2,173,840	+		RR42_RS10140	0.18	-1.4
2,173,886	+		RR42_RS10140	0.22	-0.6
2,174,022	+		RR42_RS10140	0.33	+1.3
2,174,023	-		RR42_RS10140	0.33	+0.8
2,174,026	+		RR42_RS10140	0.33	+0.9
2,174,026	+		RR42_RS10140	0.33	+0.2
2,174,026	+		RR42_RS10140	0.33	-0.8
2,174,028	+		RR42_RS10140	0.33	+0.3
2,174,029	-		RR42_RS10140	0.33	+0.1
2,174,124	+		RR42_RS10140	0.41	-0.0
2,174,288	+		RR42_RS10140	0.55	+0.3
2,174,289	-		RR42_RS10140	0.55	+1.2
2,174,378	+		RR42_RS10140	0.62	-0.0
2,174,379	-		RR42_RS10140	0.62	-0.8
2,174,493	+		RR42_RS10140	0.71	+0.5
2,174,530	+		RR42_RS10140	0.74	+1.2
2,174,531	-		RR42_RS10140	0.75	-2.1