Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09985

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,132,532	+		RR42_RS09980	0.86	-0.3
2,132,532	+		RR42_RS09980	0.86	-0.4
2,132,532	+		RR42_RS09980	0.86	-1.1
2,132,533	-		RR42_RS09980	0.86	+0.2
2,132,547	+		RR42_RS09980	0.86	+0.6
2,132,548	-		RR42_RS09980	0.86	+0.8
2,132,658	+		RR42_RS09980	0.90	-2.3
2,132,658	+		RR42_RS09980	0.90	+0.4
2,132,659	-		RR42_RS09980	0.90	-3.1
2,132,659	-		RR42_RS09980	0.90	+1.1
2,132,668	-				-3.8
2,132,668	-				+3.3
2,132,780	+				+0.2
2,132,796	+				+0.5
2,132,796	+				+0.4
2,132,797	-				-3.1
2,132,797	-				+0.9
2,132,887	-				+0.3
2,132,941	+				-0.7
2,132,954	-				-2.0
2,132,990	+				-0.8
2,133,040	+				+1.4
2,133,041	-				-2.3
2,133,041	-				+0.1
2,133,127	-				+1.3
2,133,127	-				+0.2
2,133,135	-				-0.8
2,133,286	+				+1.7
2,133,287	-				+1.8
2,133,289	+				-0.0
2,133,290	-				+0.5
2,133,290	-				-0.1
2,133,339	+				+0.4
2,133,340	-				+0.8
2,133,340	-				-2.6
2,133,419	-				-2.3
2,133,486	+				+1.7
2,133,486	+				-0.2
2,133,521	+		RR42_RS09985	0.15	-0.1
2,133,522	-		RR42_RS09985	0.16	-1.1
2,133,522	-		RR42_RS09985	0.16	+0.0
2,133,550	+		RR42_RS09985	0.22	-1.5
2,133,550	+		RR42_RS09985	0.22	+0.7
2,133,554	-		RR42_RS09985	0.23	+1.0
2,133,688	+		RR42_RS09985	0.56	+1.7
2,133,689	-		RR42_RS09985	0.56	-0.3
2,133,776	-		RR42_RS09985	0.77	-0.9
2,133,776	-		RR42_RS09985	0.77	+0.6
2,133,795	-		RR42_RS09985	0.82	-3.2
2,133,814	+		RR42_RS09985	0.86	+0.5
2,133,860	+				-2.2
2,133,860	+				-0.3
2,133,860	+				-0.5
2,133,861	-				+0.1
2,133,861	-				+1.4
2,133,861	-				+1.9
2,133,862	+				+0.5
2,133,863	-				+2.0
2,133,863	-				-1.8
2,133,863	-				-0.6
2,133,863	-				-3.4
2,133,895	+				+0.9
2,133,933	-				+0.6
2,133,933	-				-3.6
2,133,933	-				-0.5
2,133,933	-				-4.3
2,134,138	-		RR42_RS09990	0.17	-2.0
2,134,267	-		RR42_RS09990	0.26	-0.1
2,134,267	-		RR42_RS09990	0.26	-1.3
2,134,312	+		RR42_RS09990	0.29	+2.1
2,134,383	-		RR42_RS09990	0.35	-3.8
2,134,383	-		RR42_RS09990	0.35	-3.2
2,134,451	+		RR42_RS09990	0.40	-1.2
2,134,452	-		RR42_RS09990	0.40	-3.8
2,134,456	+				+1.7
2,134,456	+		RR42_RS09990	0.40	+0.5
2,134,457	-		RR42_RS09990	0.40	+1.4
2,134,457	-		RR42_RS09990	0.40	-0.3
2,134,573	-		RR42_RS09990	0.49	+0.1
2,134,618	+		RR42_RS09990	0.52	+0.9
2,134,679	-		RR42_RS09990	0.56	-1.0
2,134,706	+		RR42_RS09990	0.58	+0.4
2,134,707	-		RR42_RS09990	0.58	+0.4
2,134,707	-		RR42_RS09990	0.58	-2.7
2,134,707	-		RR42_RS09990	0.58	+1.7
2,134,726	+		RR42_RS09990	0.60	-0.3
2,134,727	-		RR42_RS09990	0.60	-1.8
2,134,754	+		RR42_RS09990	0.62	-2.2
2,134,754	+		RR42_RS09990	0.62	-0.8
2,134,755	-		RR42_RS09990	0.62	-0.9
2,134,757	-		RR42_RS09990	0.62	+0.5
2,134,859	-		RR42_RS09990	0.70	-1.1
2,134,864	-		RR42_RS09990	0.70	-3.8