Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09935

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,118,488	+				+0.3
2,118,573	+				+0.7
2,118,573	+		RR42_RS09930	0.24	-0.3
2,118,574	-		RR42_RS09930	0.24	-1.1
2,118,727	-		RR42_RS09930	0.61	-2.1
2,118,727	-		RR42_RS09930	0.61	-0.6
2,118,786	+		RR42_RS09930	0.75	-1.8
2,118,846	+		RR42_RS09930	0.89	+0.4
2,118,847	-		RR42_RS09930	0.89	+0.1
2,118,888	+				-0.5
2,118,888	+				-1.5
2,118,889	-				-2.7
2,118,889	-				+1.3
2,118,889	-				+1.2
2,118,980	+				+0.3
2,118,980	+				+0.5
2,118,980	+				-1.5
2,118,980	+				+0.8
2,118,980	+				-0.8
2,118,981	-				+0.4
2,118,983	-				-2.1
2,118,999	+				-2.1
2,119,000	-				+1.5
2,119,067	-				-3.8
2,119,067	-				+0.4
2,119,153	-				+0.7
2,119,240	+				-0.6
2,119,241	-				+1.4
2,119,244	+				-1.1
2,119,244	+				+0.2
2,119,395	+				+1.0
2,119,395	+				-2.8
2,119,395	+				-1.6
2,119,395	+				-1.6
2,119,395	+				+0.1
2,119,395	+				-1.6
2,119,395	+				+1.2
2,119,447	-				-2.6
2,119,447	-				+0.9
2,119,486	+		RR42_RS09935	0.12	+0.7
2,119,487	-		RR42_RS09935	0.12	-3.8
2,119,732	+		RR42_RS09935	0.39	-0.2
2,119,732	+		RR42_RS09935	0.39	+3.5
2,119,732	+		RR42_RS09935	0.39	+0.6
2,119,732	+		RR42_RS09935	0.39	-0.9
2,119,733	-		RR42_RS09935	0.39	-0.7
2,119,733	-		RR42_RS09935	0.39	+2.4
2,119,733	-		RR42_RS09935	0.39	-1.7
2,119,828	+		RR42_RS09935	0.49	-3.0
2,119,828	+		RR42_RS09935	0.49	+0.5
2,119,829	-		RR42_RS09935	0.49	+0.9
2,120,039	-		RR42_RS09935	0.72	+0.1
2,120,100	-		RR42_RS09935	0.79	-0.3
2,120,155	+		RR42_RS09935	0.85	+1.4
2,120,156	-		RR42_RS09935	0.85	-2.0
2,120,156	-		RR42_RS09935	0.85	+0.1
2,120,156	-		RR42_RS09935	0.85	-1.2
2,120,254	+				+1.2
2,120,255	-				-0.4
2,120,267	+				-0.4
2,120,267	+				-1.0
2,120,267	+				+0.6
2,120,457	+				+1.5
2,120,513	+				-0.4
2,120,513	+				-0.3
2,120,513	+				-3.0
2,120,513	+				-0.4
2,120,513	+				-0.4
2,120,513	+				-3.6
2,120,513	+				-0.3
2,120,572	+				+1.3
2,120,642	-				+0.8
2,120,683	+				-0.3
2,120,684	-				+0.7
2,120,684	-				+0.9
2,120,684	-				-1.1
2,120,689	-				+2.0
2,120,689	-				+0.5
2,120,689	-				-1.3
2,120,693	-				-2.5
2,120,763	+				-2.3
2,120,887	+				-1.1
2,120,943	+				+0.3
2,120,943	+				+1.4
2,120,967	+				-1.6
2,120,967	+				+1.6
2,120,968	-				+0.3
2,121,016	+		RR42_RS09940	0.12	-1.0
2,121,017	-		RR42_RS09940	0.12	-2.8
2,121,097	+		RR42_RS09940	0.21	-0.3
2,121,097	+		RR42_RS09940	0.21	+0.8
2,121,099	+		RR42_RS09940	0.21	+0.2
2,121,099	+		RR42_RS09940	0.21	-0.5
2,121,099	+		RR42_RS09940	0.21	+1.2
2,121,100	-		RR42_RS09940	0.21	-1.2
2,121,100	-		RR42_RS09940	0.21	+0.4
2,121,100	-		RR42_RS09940	0.21	-2.0
2,121,100	-		RR42_RS09940	0.21	+0.1
2,121,259	+		RR42_RS09940	0.38	+1.3
2,121,270	+		RR42_RS09940	0.39	+1.4
2,121,270	+		RR42_RS09940	0.39	+0.4
2,121,270	+		RR42_RS09940	0.39	-0.3
2,121,270	+		RR42_RS09940	0.39	+1.3
2,121,270	+		RR42_RS09940	0.39	+0.7
2,121,270	+		RR42_RS09940	0.39	+0.8
2,121,270	+		RR42_RS09940	0.39	-2.5
2,121,270	+		RR42_RS09940	0.39	-0.5
2,121,271	-		RR42_RS09940	0.39	+0.2
2,121,271	-		RR42_RS09940	0.39	-2.1
2,121,271	-		RR42_RS09940	0.39	-3.4
2,121,272	+		RR42_RS09940	0.39	+0.4
2,121,272	+		RR42_RS09940	0.39	-2.4
2,121,272	+		RR42_RS09940	0.39	-2.8
2,121,273	-		RR42_RS09940	0.39	+0.3
2,121,273	-		RR42_RS09940	0.39	-2.7