Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09905

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,112,467	-		RR42_RS09900	0.28	-3.1
2,112,493	+		RR42_RS09900	0.30	+0.5
2,112,494	-		RR42_RS09900	0.30	-1.7
2,112,494	-		RR42_RS09900	0.30	-0.8
2,112,499	+		RR42_RS09900	0.31	+1.1
2,112,617	+		RR42_RS09900	0.43	+1.5
2,112,706	+		RR42_RS09900	0.51	-1.1
2,112,706	+		RR42_RS09900	0.51	+3.4
2,112,838	+		RR42_RS09900	0.65	-0.9
2,112,838	+		RR42_RS09900	0.65	+0.6
2,112,839	-		RR42_RS09900	0.65	-0.4
2,112,898	+		RR42_RS09900	0.71	+1.6
2,112,979	+		RR42_RS09900	0.79	-0.8
2,113,121	-				-4.0
2,113,122	+				+0.4
2,113,122	+				+1.3
2,113,178	-				+1.9
2,113,248	+				+0.5
2,113,249	-				+0.7
2,113,285	+				-0.1
2,113,315	+				-1.1
2,113,315	+				+2.5
2,113,373	-				+0.7
2,113,454	-				+0.5
2,113,888	-		RR42_RS09905	0.33	-2.5
2,113,888	-		RR42_RS09905	0.33	+1.2
2,114,075	+		RR42_RS09905	0.47	+0.8
2,114,075	+		RR42_RS09905	0.47	+0.5
2,114,075	+		RR42_RS09905	0.47	-0.5
2,114,110	+		RR42_RS09905	0.49	+1.1
2,114,157	+		RR42_RS09905	0.53	+1.7
2,114,230	-		RR42_RS09905	0.59	-3.0
2,114,359	-		RR42_RS09905	0.68	-0.6
2,114,371	-		RR42_RS09905	0.69	-1.3
2,114,613	-		RR42_RS09905	0.88	-3.3
2,114,631	-		RR42_RS09905	0.89	-2.1
2,114,903	+		RR42_RS09910	0.15	-3.1
2,114,903	+		RR42_RS09910	0.15	+0.7
2,114,903	+		RR42_RS09910	0.15	-0.8
2,114,904	-		RR42_RS09910	0.15	-0.1
2,114,926	+		RR42_RS09910	0.18	+2.4
2,114,962	-		RR42_RS09910	0.23	-2.8
2,115,052	-		RR42_RS09910	0.34	-2.8
2,115,070	+		RR42_RS09910	0.36	-0.5
2,115,070	+		RR42_RS09910	0.36	-0.5
2,115,112	+		RR42_RS09910	0.41	-2.0
2,115,113	-		RR42_RS09910	0.41	-0.1
2,115,113	-		RR42_RS09910	0.41	-0.8
2,115,128	-		RR42_RS09910	0.43	-0.7
2,115,128	-		RR42_RS09910	0.43	-1.1
2,115,229	+		RR42_RS09910	0.56	+0.9
2,115,358	+		RR42_RS09910	0.72	+1.2
2,115,358	+		RR42_RS09910	0.72	-0.2
2,115,359	-		RR42_RS09910	0.72	-0.9
2,115,389	+		RR42_RS09910	0.76	+0.5
2,115,390	-		RR42_RS09910	0.76	+0.6
2,115,611	+				+1.3
2,115,612	-				-4.1
2,115,612	-				+0.4