Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09535

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,019,994	-				-1.1
2,019,994	-				+0.1
2,019,994	-				-3.2
2,020,030	-				+1.2
2,020,030	-				-1.2
2,020,061	+				+0.6
2,020,062	-				-2.2
2,020,207	+				+0.2
2,020,357	+		RR42_RS09530	0.22	+0.8
2,020,357	+		RR42_RS09530	0.22	-0.5
2,020,357	+		RR42_RS09530	0.22	+0.1
2,020,357	+		RR42_RS09530	0.22	+0.1
2,020,357	+		RR42_RS09530	0.22	-1.3
2,020,358	-		RR42_RS09530	0.22	+0.2
2,020,358	-		RR42_RS09530	0.22	-3.1
2,020,358	-		RR42_RS09530	0.22	+1.4
2,020,358	-		RR42_RS09530	0.22	-1.3
2,020,661	-		RR42_RS09530	0.63	+0.3
2,020,836	+		RR42_RS09530	0.87	+1.4
2,020,836	+		RR42_RS09530	0.87	-0.3
2,020,836	+		RR42_RS09530	0.87	-0.9
2,021,049	+				+1.3
2,021,049	+				+0.4
2,021,050	-				+1.9
2,021,050	-				+0.4
2,021,079	+				+0.7
2,021,079	+				+1.4
2,021,211	+		RR42_RS09535	0.22	+1.1
2,021,211	+		RR42_RS09535	0.22	+0.3
2,021,212	-		RR42_RS09535	0.22	+0.1
2,021,212	-		RR42_RS09535	0.22	+0.1
2,021,248	-		RR42_RS09535	0.26	-4.0
2,021,328	+		RR42_RS09535	0.34	+0.0
2,021,755	+		RR42_RS09535	0.74	+1.1
2,021,755	+		RR42_RS09535	0.74	+0.0
2,021,756	-		RR42_RS09535	0.74	+0.9
2,021,914	-		RR42_RS09535	0.89	-4.3
2,022,170	-				+0.4
2,022,185	+				+0.3
2,022,185	+				+0.3
2,022,287	+				-0.2
2,022,338	+				-0.7
2,022,339	-				+1.0
2,022,339	-				-1.8
2,022,339	-				+1.3
2,022,435	+		RR42_RS09540	0.27	+1.0
2,022,435	+		RR42_RS09540	0.27	+0.3
2,022,436	-		RR42_RS09540	0.27	-3.3
2,022,445	-		RR42_RS09540	0.28	-4.4
2,022,445	-		RR42_RS09540	0.28	+1.3
2,022,575	-		RR42_RS09540	0.52	+1.5
2,022,674	+		RR42_RS09540	0.69	-0.6
2,022,675	-		RR42_RS09540	0.69	+0.7
2,022,882	+				+1.5
2,022,883	-				-0.1
2,022,883	-				-1.1
2,022,969	+				-0.5
2,022,969	+				-2.6
2,022,970	-				+1.0
2,022,970	-				+1.3
2,022,970	-				+1.7
2,022,973	+				+0.9
2,023,024	-				+0.7