Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09400

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,991,038	+		RR42_RS09395	0.59	+1.0
1,991,038	+		RR42_RS09395	0.59	+0.1
1,991,039	-		RR42_RS09395	0.59	+2.1
1,991,042	+		RR42_RS09395	0.59	+0.5
1,991,043	-		RR42_RS09395	0.59	-4.1
1,991,049	-		RR42_RS09395	0.60	-0.0
1,991,148	-		RR42_RS09395	0.67	-2.7
1,991,266	+		RR42_RS09395	0.76	+0.4
1,991,267	-		RR42_RS09395	0.76	+1.3
1,991,354	+		RR42_RS09395	0.83	+0.5
1,991,695	-				+0.8
1,991,758	+				-2.2
1,991,759	-				+2.1
1,991,759	-				-0.7
1,991,759	-				-1.5
1,991,806	-				-0.7
1,991,833	-				-0.3
1,991,920	+				-0.3
1,991,949	+				-0.3
1,991,950	-				+1.1
1,991,950	-				-2.3
1,991,970	+				-2.8
1,991,970	+				-1.8
1,991,985	+				+0.5
1,991,985	+				+0.6
1,991,986	-				-0.2
1,992,076	+		RR42_RS09400	0.13	+0.6
1,992,076	+		RR42_RS09400	0.13	-2.7
1,992,076	+		RR42_RS09400	0.13	-1.2
1,992,076	+		RR42_RS09400	0.13	-0.6
1,992,077	-		RR42_RS09400	0.13	-2.0
1,992,125	+		RR42_RS09400	0.17	+0.7
1,992,309	+		RR42_RS09400	0.34	-0.8
1,992,309	+		RR42_RS09400	0.34	-0.7
1,992,359	-		RR42_RS09400	0.38	+0.9
1,992,425	+		RR42_RS09400	0.44	-1.0
1,992,426	-		RR42_RS09400	0.44	+2.5
1,992,426	-		RR42_RS09400	0.44	-1.4
1,992,438	+		RR42_RS09400	0.45	-3.8
1,992,510	+		RR42_RS09400	0.51	+0.9
1,992,525	+		RR42_RS09400	0.52	+1.0
1,992,526	-		RR42_RS09400	0.52	+1.0
1,992,526	-		RR42_RS09400	0.52	-0.8
1,992,645	+		RR42_RS09400	0.63	-0.9
1,992,645	+		RR42_RS09400	0.63	+0.8
1,992,879	+		RR42_RS09400	0.83	+2.0
1,993,051	+				+0.0
1,993,089	-				+0.3
1,993,089	-				-1.0
1,993,089	-				-0.8
1,993,430	+		RR42_RS09405	0.17	-0.6
1,993,430	+		RR42_RS09405	0.17	+1.3
1,993,431	-		RR42_RS09405	0.17	-1.8
1,993,466	-		RR42_RS09405	0.20	+0.5
1,993,605	-		RR42_RS09405	0.33	-4.5
1,993,901	+		RR42_RS09405	0.61	-3.0
1,993,902	-		RR42_RS09405	0.61	+1.0
1,994,009	+		RR42_RS09405	0.71	+1.1