Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09395

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,989,391	+		RR42_RS09390	0.72	+1.5
1,989,463	-		RR42_RS09390	0.74	-0.7
1,989,595	+		RR42_RS09390	0.79	-1.6
1,989,747	+		RR42_RS09390	0.85	+0.2
1,989,747	+		RR42_RS09390	0.85	+0.4
1,989,843	+		RR42_RS09390	0.88	+0.2
1,989,844	-		RR42_RS09390	0.88	+1.1
1,989,906	-				+2.0
1,990,526	+		RR42_RS09395	0.20	-2.3
1,990,527	-		RR42_RS09395	0.20	-3.0
1,990,598	+		RR42_RS09395	0.25	-0.7
1,990,598	+		RR42_RS09395	0.25	-1.1
1,990,599	-		RR42_RS09395	0.25	+0.7
1,991,038	+		RR42_RS09395	0.59	+1.0
1,991,038	+		RR42_RS09395	0.59	+0.1
1,991,039	-		RR42_RS09395	0.59	+2.1
1,991,042	+		RR42_RS09395	0.59	+0.5
1,991,043	-		RR42_RS09395	0.59	-4.1
1,991,049	-		RR42_RS09395	0.60	-0.0
1,991,148	-		RR42_RS09395	0.67	-2.7
1,991,266	+		RR42_RS09395	0.76	+0.4
1,991,267	-		RR42_RS09395	0.76	+1.3
1,991,354	+		RR42_RS09395	0.83	+0.5
1,991,695	-				+0.8
1,991,758	+				-2.2
1,991,759	-				+2.1
1,991,759	-				-0.7
1,991,759	-				-1.5
1,991,806	-				-0.7
1,991,833	-				-0.3
1,991,920	+				-0.3
1,991,949	+				-0.3
1,991,950	-				+1.1
1,991,950	-				-2.3
1,991,970	+				-2.8
1,991,970	+				-1.8
1,991,985	+				+0.5
1,991,985	+				+0.6
1,991,986	-				-0.2
1,992,076	+		RR42_RS09400	0.13	+0.6
1,992,076	+		RR42_RS09400	0.13	-2.7
1,992,076	+		RR42_RS09400	0.13	-1.2
1,992,076	+		RR42_RS09400	0.13	-0.6
1,992,077	-		RR42_RS09400	0.13	-2.0
1,992,125	+		RR42_RS09400	0.17	+0.7
1,992,309	+		RR42_RS09400	0.34	-0.8
1,992,309	+		RR42_RS09400	0.34	-0.7
1,992,359	-		RR42_RS09400	0.38	+0.9
1,992,425	+		RR42_RS09400	0.44	-1.0
1,992,426	-		RR42_RS09400	0.44	+2.5
1,992,426	-		RR42_RS09400	0.44	-1.4
1,992,438	+		RR42_RS09400	0.45	-3.8
1,992,510	+		RR42_RS09400	0.51	+0.9
1,992,525	+		RR42_RS09400	0.52	+1.0
1,992,526	-		RR42_RS09400	0.52	+1.0
1,992,526	-		RR42_RS09400	0.52	-0.8