Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08830

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,851,865	+		RR42_RS08825	0.38	-1.2
1,851,955	+		RR42_RS08825	0.44	+0.8
1,851,956	-		RR42_RS08825	0.45	+0.6
1,851,956	-		RR42_RS08825	0.45	+1.2
1,851,956	-		RR42_RS08825	0.45	+0.8
1,851,956	-		RR42_RS08825	0.45	-0.8
1,852,092	-		RR42_RS08825	0.54	+1.6
1,852,477	+		RR42_RS08825	0.82	+1.5
1,852,477	+		RR42_RS08825	0.82	+0.2
1,852,478	-		RR42_RS08825	0.82	+1.2
1,852,643	+				-0.4
1,852,708	-				-2.2
1,852,710	+				-1.2
1,852,711	-				+0.6
1,852,719	-				-3.5
1,852,719	-				-2.6
1,852,719	-				+0.8
1,852,719	-				+0.3
1,852,736	-				-0.2
1,852,736	-				-0.2
1,852,736	-				-1.4
1,852,896	+				+2.8
1,852,897	-				-0.4
1,853,089	+		RR42_RS08830	0.20	-1.3
1,853,090	-		RR42_RS08830	0.20	-2.6
1,853,344	-		RR42_RS08830	0.40	-1.1
1,853,344	-		RR42_RS08830	0.40	-1.8
1,853,355	+		RR42_RS08830	0.41	-0.2
1,853,355	+		RR42_RS08830	0.41	-1.8
1,853,355	+		RR42_RS08830	0.41	+0.5
1,853,356	-		RR42_RS08830	0.41	+1.0
1,853,356	-		RR42_RS08830	0.41	+1.7
1,853,358	+		RR42_RS08830	0.41	-2.3
1,853,359	-		RR42_RS08830	0.41	+0.8
1,853,359	-		RR42_RS08830	0.41	-2.5
1,853,359	-		RR42_RS08830	0.41	+1.1
1,853,359	-		RR42_RS08830	0.41	-1.5
1,853,388	+		RR42_RS08830	0.44	-0.5
1,853,413	-		RR42_RS08830	0.46	+2.5
1,853,413	-		RR42_RS08830	0.46	-0.8
1,853,553	+		RR42_RS08830	0.57	-1.2
1,853,738	+		RR42_RS08830	0.72	-0.5
1,853,739	-		RR42_RS08830	0.72	-0.1
1,853,739	-		RR42_RS08830	0.72	-4.0
1,853,987	+				-0.3
1,853,987	+				-4.0
1,853,988	-				+1.4
1,853,988	-				+0.3
1,854,125	-				-1.4
1,854,125	-				+1.6
1,854,184	+				-0.2
1,854,185	-				-0.5
1,854,185	-				-3.0
1,854,190	+				-1.1
1,854,191	-				+1.6
1,854,263	-				+2.7
1,854,263	-				+1.9
1,854,814	+		RR42_RS08835	0.34	-0.1
1,854,814	+		RR42_RS08835	0.34	+2.5
1,854,832	+		RR42_RS08835	0.35	-0.6
1,854,833	-		RR42_RS08835	0.36	-1.8