Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07675

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,643,534	+				-1.3
1,643,534	+				+0.8
1,643,535	-				-1.5
1,643,535	-				+0.6
1,643,584	+				+0.8
1,643,584	+				-0.0
1,643,584	+				-3.7
1,643,585	-				+0.8
1,643,585	-				-1.7
1,643,725	+				-2.5
1,643,725	+				+0.6
1,643,737	+				+2.9
1,643,738	-				+0.9
1,643,738	-				+0.3
1,643,788	-				+0.5
1,643,791	+				-1.1
1,643,791	+				-0.0
1,643,792	-				-0.1
1,643,792	-				-2.7
1,643,792	-				+0.5
1,643,792	-				+0.4
1,643,859	+				-1.0
1,643,860	-				+0.6
1,643,964	+				+0.7
1,643,998	+				-2.3
1,643,999	-				+0.4
1,644,050	+				+0.5
1,644,050	+				-3.5
1,644,050	+				-2.5
1,644,051	-				-0.5
1,644,051	-				-2.5
1,644,088	-				+0.2
1,644,314	+				+1.9
1,644,314	+				-2.7
1,644,390	+				-0.7
1,644,390	+				-2.5
1,644,391	-				-0.7
1,644,391	-				-0.0
1,644,449	-				+2.2
1,644,478	+				+0.1
1,644,479	-				+2.6
1,644,479	-				-0.1
1,644,479	-				-2.9
1,644,663	+		RR42_RS07675	0.11	+1.3
1,644,663	+		RR42_RS07675	0.11	+1.0
1,644,664	-		RR42_RS07675	0.12	-0.6
1,644,664	-		RR42_RS07675	0.12	+0.4
1,644,715	+		RR42_RS07675	0.15	+1.4
1,644,715	+		RR42_RS07675	0.15	-1.1
1,644,716	-		RR42_RS07675	0.15	-1.1
1,644,716	-		RR42_RS07675	0.15	+0.9
1,644,866	+		RR42_RS07675	0.26	-2.7
1,644,866	+		RR42_RS07675	0.26	+1.1
1,644,885	+		RR42_RS07675	0.27	+0.9
1,644,931	+		RR42_RS07675	0.30	+2.6
1,644,961	+		RR42_RS07675	0.32	+0.3
1,644,962	-		RR42_RS07675	0.32	-0.8
1,644,962	-		RR42_RS07675	0.32	-0.2
1,645,017	+		RR42_RS07675	0.36	-1.4
1,645,018	-		RR42_RS07675	0.36	+1.0
1,645,240	+		RR42_RS07675	0.52	+0.7
1,645,244	-		RR42_RS07675	0.52	-3.6
1,645,560	+		RR42_RS07675	0.74	+1.0
1,645,560	+		RR42_RS07675	0.74	-0.3
1,645,561	-		RR42_RS07675	0.74	+0.2
1,645,561	-		RR42_RS07675	0.74	+0.0
1,645,566	-		RR42_RS07675	0.74	-2.3
1,645,566	-		RR42_RS07675	0.74	-0.6
1,645,566	-		RR42_RS07675	0.74	+1.2
1,645,668	+		RR42_RS07675	0.82	-1.9
1,645,669	-		RR42_RS07675	0.82	+0.7
1,645,719	-		RR42_RS07675	0.85	-3.0
1,645,731	-		RR42_RS07675	0.86	-1.3
1,645,731	-		RR42_RS07675	0.86	+0.8
1,645,753	+		RR42_RS07675	0.87	-0.1
1,645,753	+		RR42_RS07675	0.87	-3.0
1,645,928	-				-2.0
1,646,145	+				+1.0
1,646,210	-				-1.9
1,646,233	-				-0.5
1,646,233	-				-3.9
1,646,372	+				-0.1
1,646,373	-				+1.9
1,646,373	-				+1.8
1,646,373	-				+2.8
1,646,497	+		RR42_RS07680	0.18	+1.0
1,646,599	-		RR42_RS07680	0.28	+1.0
1,646,813	+		RR42_RS07680	0.49	-0.0
1,646,813	+		RR42_RS07680	0.49	-2.2
1,646,814	-		RR42_RS07680	0.49	-1.5
1,646,814	-		RR42_RS07680	0.49	+1.2
1,646,840	+		RR42_RS07680	0.52	+0.4
1,646,840	+		RR42_RS07680	0.52	+2.3