Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07610
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,629,543 | - | RR42_RS07605 | 0.69 | -0.3 | |
1,629,656 | - | RR42_RS07605 | 0.75 | -1.8 | |
1,629,744 | - | RR42_RS07605 | 0.80 | -1.3 | |
1,629,749 | + | RR42_RS07605 | 0.81 | -0.4 | |
1,629,750 | - | RR42_RS07605 | 0.81 | -2.2 | |
1,630,046 | + | +4.2 | |||
1,630,095 | - | +0.6 | |||
1,630,144 | - | -4.6 | |||
1,630,192 | + | -3.7 | |||
1,630,626 | + | RR42_RS07610 | 0.38 | -2.0 | |
1,630,626 | + | RR42_RS07610 | 0.38 | -3.2 | |
1,630,627 | - | RR42_RS07610 | 0.38 | -4.6 | |
1,630,636 | - | RR42_RS07610 | 0.39 | -0.1 | |
1,630,674 | + | RR42_RS07610 | 0.42 | -3.0 | |
1,630,675 | - | RR42_RS07610 | 0.42 | -3.4 | |
1,631,174 | + | RR42_RS07610 | 0.85 | -4.2 | |
1,631,175 | - | RR42_RS07610 | 0.85 | -1.6 | |
1,631,444 | + | -1.7 | |||
1,631,444 | + | -3.2 | |||
1,631,451 | + | -4.3 | |||
1,631,466 | - | -3.0 | |||
1,631,466 | - | -2.5 | |||
1,631,469 | + | -4.5 | |||
1,631,469 | + | -2.8 | |||
1,631,469 | + | +0.6 | |||
1,631,470 | - | -4.5 | |||
1,631,488 | + | +0.2 | |||
1,631,488 | + | -2.9 | |||
1,631,492 | + | -2.9 | |||
1,631,492 | + | -3.0 | |||
1,631,926 | + | RR42_RS07615 | 0.62 | -2.5 | |
1,631,926 | + | RR42_RS07615 | 0.62 | -3.3 | |
1,631,927 | - | RR42_RS07615 | 0.62 | -0.7 | |
1,632,324 | + | -2.8 |
Or see this region's nucleotide sequence