Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07465

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,594,973	+		RR42_RS07460	0.14	-3.0
1,594,973	+		RR42_RS07460	0.14	+1.3
1,595,033	+		RR42_RS07460	0.20	+1.7
1,595,034	-		RR42_RS07460	0.20	+1.0
1,595,069	+		RR42_RS07460	0.23	+0.7
1,595,156	+		RR42_RS07460	0.32	+0.4
1,595,192	+		RR42_RS07460	0.35	-1.3
1,595,192	+		RR42_RS07460	0.35	+1.8
1,595,194	+		RR42_RS07460	0.35	+0.9
1,595,195	-		RR42_RS07460	0.35	-0.6
1,595,268	-		RR42_RS07460	0.42	-2.8
1,595,268	-		RR42_RS07460	0.42	-3.9
1,595,268	-		RR42_RS07460	0.42	-0.6
1,595,504	+		RR42_RS07460	0.64	-2.6
1,595,516	+		RR42_RS07460	0.66	+0.3
1,595,696	+		RR42_RS07460	0.83	-2.8
1,595,697	-		RR42_RS07460	0.83	+1.7
1,595,724	-		RR42_RS07460	0.85	+1.8
1,595,768	+		RR42_RS07460	0.89	+0.9
1,595,884	+				+0.1
1,595,884	+				+0.7
1,595,885	-				+2.7
1,595,885	-				+0.2
1,595,907	-				-0.0
1,595,907	-				-1.1
1,595,907	-				+1.7
1,597,011	+				+0.5
1,597,011	+				-3.3
1,597,012	-				-3.5
1,597,244	-		RR42_RS07470	0.20	-0.2
1,597,244	-		RR42_RS07470	0.20	-2.1
1,597,282	+		RR42_RS07470	0.24	-1.3
1,597,283	-		RR42_RS07470	0.25	-0.4
1,597,283	-		RR42_RS07470	0.25	+2.2
1,597,283	-		RR42_RS07470	0.25	-2.1
1,597,336	+		RR42_RS07470	0.31	-3.3
1,597,336	+		RR42_RS07470	0.31	-2.3
1,597,336	+		RR42_RS07470	0.31	+0.8
1,597,336	+		RR42_RS07470	0.31	-0.9
1,597,337	-		RR42_RS07470	0.31	+1.6
1,597,337	-		RR42_RS07470	0.31	+0.1
1,597,345	+		RR42_RS07470	0.32	-2.1
1,597,372	+		RR42_RS07470	0.35	+1.3
1,597,373	-		RR42_RS07470	0.35	-4.0
1,597,373	-		RR42_RS07470	0.35	+1.5
1,597,373	-		RR42_RS07470	0.35	-3.6
1,597,381	+		RR42_RS07470	0.36	-1.1
1,597,382	-		RR42_RS07470	0.36	-0.4
1,597,382	-		RR42_RS07470	0.36	+0.5
1,597,382	-		RR42_RS07470	0.36	+0.3
1,597,382	-		RR42_RS07470	0.36	+0.3
1,597,382	-		RR42_RS07470	0.36	+0.6
1,597,382	-		RR42_RS07470	0.36	-1.5
1,597,517	-		RR42_RS07470	0.52	-0.4
1,597,517	-		RR42_RS07470	0.52	+1.5
1,597,570	+		RR42_RS07470	0.58	+0.5
1,597,579	+		RR42_RS07470	0.59	+0.5
1,597,579	+		RR42_RS07470	0.59	+0.8
1,597,588	+		RR42_RS07470	0.61	+1.2
1,597,589	-		RR42_RS07470	0.61	+0.2
1,597,603	+		RR42_RS07470	0.62	-3.9
1,597,603	+		RR42_RS07470	0.62	+1.0
1,597,604	-		RR42_RS07470	0.62	+0.0
1,597,604	-		RR42_RS07470	0.62	-0.5
1,597,742	+		RR42_RS07470	0.79	-1.9
1,597,742	+		RR42_RS07470	0.79	-0.6
1,597,743	-		RR42_RS07470	0.79	+1.7
1,597,786	+		RR42_RS07470	0.84	-0.2
1,597,786	+		RR42_RS07470	0.84	-0.3
1,597,787	-		RR42_RS07470	0.84	+1.0
1,597,787	-		RR42_RS07470	0.84	+2.4
1,597,852	+				-1.1
1,597,852	+				-0.4
1,597,853	-				+1.0
1,597,864	+				+2.2
1,597,865	-				-1.8
1,597,879	+				-1.6
1,597,879	+				-3.6
1,597,879	+				+1.4
1,597,880	-				+0.7
1,597,880	-				+1.1
1,597,911	+				-0.9