Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07360
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,568,636 | - | RR42_RS07350 | 0.81 | +0.8 | |
1,568,711 | + | -2.9 | |||
1,568,711 | + | +0.9 | |||
1,568,711 | + | -2.1 | |||
1,568,712 | - | +0.8 | |||
1,568,712 | - | +0.6 | |||
1,570,245 | - | RR42_RS07360 | 0.25 | -3.0 | |
1,570,502 | + | RR42_RS07360 | 0.35 | +2.7 | |
1,570,644 | - | RR42_RS07360 | 0.40 | +2.3 | |
1,570,839 | - | RR42_RS07360 | 0.48 | +2.8 | |
1,570,839 | - | RR42_RS07360 | 0.48 | +3.8 | |
1,571,043 | - | RR42_RS07360 | 0.56 | +2.4 | |
1,571,546 | + | RR42_RS07360 | 0.75 | +1.3 | |
1,571,547 | - | RR42_RS07360 | 0.75 | +4.5 | |
1,572,359 | + | -0.8 | |||
1,572,364 | + | -0.1 | |||
1,572,960 | + | RR42_RS07365 | 0.13 | +2.7 |
Or see this region's nucleotide sequence