Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07240

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,542,815	+		RR42_RS07235	0.57	+1.3
1,542,815	+		RR42_RS07235	0.57	-0.2
1,542,816	-		RR42_RS07235	0.58	-1.0
1,542,936	+				+0.1
1,542,936	+				-3.7
1,542,936	+				+2.7
1,542,936	+				-3.2
1,542,937	-				+0.7
1,542,937	-				-0.6
1,542,937	-				-2.2
1,542,937	-				+0.9
1,542,937	-				+0.1
1,542,937	-				+0.8
1,542,937	-				-1.5
1,542,937	-				-2.8
1,542,938	+				-2.4
1,542,938	+				+0.9
1,542,938	+				+0.3
1,542,938	+				-2.7
1,542,938	+				+0.4
1,542,938	+				-2.5
1,542,938	+				-0.4
1,542,939	-				+2.2
1,542,939	-				+1.7
1,542,939	-				+0.6
1,542,939	-				-3.8
1,542,939	-				+0.6
1,542,939	-				-0.4
1,542,939	-				-1.8
1,542,939	-				-2.8
1,542,939	-				-0.8
1,543,015	+				+0.6
1,543,213	+				-2.9
1,543,218	+				-3.2
1,543,249	+				-0.8
1,543,249	+				-0.2
1,543,283	+				+0.8
1,543,321	+				-1.0
1,543,339	+				+0.8
1,543,339	+				-0.1
1,543,340	-				-2.3
1,543,346	-				+0.4
1,543,353	-				-1.6
1,543,431	+				-2.1
1,543,661	+				+0.2
1,543,661	+				+2.1
1,543,943	+		RR42_RS07240	0.61	-2.0
1,543,944	-		RR42_RS07240	0.61	+0.0
1,544,041	-				-1.6
1,544,103	-				+0.9
1,544,214	+				+1.3
1,544,214	+				-0.1
1,544,219	+				+1.4
1,544,225	+				+0.9
1,544,226	-				-0.4
1,544,381	-		RR42_RS07245	0.52	-2.4
1,544,420	-		RR42_RS07245	0.65	+1.6
1,544,536	+				+0.7
1,544,783	-				-1.5
1,544,834	+				+0.9
1,544,834	+				-0.6
1,544,834	+				+1.3
1,544,834	+				+1.6
1,544,834	+				+0.3
1,544,835	-				-4.0
1,544,835	-				-0.7
1,544,894	-		RR42_RS07255	0.13	-1.6
1,544,894	-		RR42_RS07255	0.13	+0.4