Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06435

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,407,668	-				-2.3
1,407,756	+		RR42_RS06425	0.16	-3.1
1,407,963	+		RR42_RS06425	0.54	-3.2
1,407,964	-		RR42_RS06425	0.54	+0.5
1,408,088	+		RR42_RS06425	0.77	-3.1
1,408,088	+		RR42_RS06425	0.77	-1.4
1,408,089	-		RR42_RS06425	0.77	-0.1
1,408,089	-		RR42_RS06425	0.77	+1.1
1,408,089	-		RR42_RS06425	0.77	+1.0
1,408,089	-		RR42_RS06425	0.77	+0.2
1,408,153	+		RR42_RS06425	0.89	-0.2
1,408,154	-		RR42_RS06425	0.89	+0.5
1,408,167	-				-3.5
1,408,239	+				-0.1
1,408,355	+		RR42_RS06430	0.24	+1.5
1,408,356	-		RR42_RS06430	0.25	+0.0
1,408,795	+		RR42_RS06435	0.17	+0.6
1,408,795	+		RR42_RS06435	0.17	+0.7
1,408,795	+		RR42_RS06435	0.17	+2.0
1,409,389	+		RR42_RS06435	0.59	+0.9
1,409,389	+		RR42_RS06435	0.59	+1.2
1,409,390	-		RR42_RS06435	0.59	-2.5
1,409,390	-		RR42_RS06435	0.59	-2.5
1,409,448	+		RR42_RS06435	0.63	-0.0
1,409,480	+		RR42_RS06435	0.65	+1.3
1,409,736	+		RR42_RS06435	0.83	+0.8
1,409,736	+		RR42_RS06435	0.83	-1.6
1,409,854	+				+0.4
1,409,879	-				+0.9
1,410,105	+		RR42_RS06440	0.12	+0.3
1,410,105	+		RR42_RS06440	0.12	-2.5
1,410,106	-		RR42_RS06440	0.13	+0.2
1,410,117	+		RR42_RS06440	0.15	+0.5
1,410,261	+		RR42_RS06440	0.54	+0.5
1,410,681	-		RR42_RS06445	0.29	+2.9
1,410,845	+		RR42_RS06445	0.56	+1.1
1,410,846	-		RR42_RS06445	0.56	+0.4
1,410,846	-		RR42_RS06445	0.56	-3.8