Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06390

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,399,862	+		RR42_RS06385	0.28	-1.0
1,399,862	+		RR42_RS06385	0.28	+0.4
1,399,862	+		RR42_RS06385	0.28	+1.2
1,400,051	+		RR42_RS06385	0.45	-0.1
1,400,434	-		RR42_RS06385	0.80	-2.6
1,400,434	-		RR42_RS06385	0.80	+0.1
1,400,457	-		RR42_RS06385	0.82	+1.5
1,400,525	+		RR42_RS06385	0.88	-0.3
1,400,526	-		RR42_RS06385	0.88	-1.6
1,400,528	+		RR42_RS06385	0.88	+0.2
1,400,529	-		RR42_RS06385	0.88	-0.0
1,400,529	-		RR42_RS06385	0.88	+0.6
1,400,748	+				-2.6
1,400,748	+				+0.8
1,400,749	-				+0.4
1,400,933	+		RR42_RS06390	0.10	-0.4
1,401,016	-		RR42_RS06390	0.19	-2.9
1,401,177	-		RR42_RS06390	0.37	+2.4
1,401,177	-		RR42_RS06390	0.37	+0.8
1,401,337	+		RR42_RS06390	0.54	-0.0
1,401,337	+		RR42_RS06390	0.54	-1.9
1,401,337	+		RR42_RS06390	0.54	+0.7
1,401,338	-		RR42_RS06390	0.54	+0.1
1,401,338	-		RR42_RS06390	0.54	+1.8
1,401,408	-		RR42_RS06390	0.62	-2.7
1,401,563	+		RR42_RS06390	0.79	+0.1
1,401,563	+		RR42_RS06390	0.79	+0.2
1,401,563	+		RR42_RS06390	0.79	+1.2
1,401,564	-		RR42_RS06390	0.79	+0.3
1,401,759	+				+0.9
1,401,760	-				-2.8
1,401,760	-				-0.2
1,401,760	-				+2.8
1,401,763	+				-0.5
1,401,764	-				-0.1
1,401,778	-				-3.1
1,401,790	+				+2.4
1,401,947	+		RR42_RS06395	0.24	-3.5
1,401,948	-		RR42_RS06395	0.24	+1.9
1,402,088	+		RR42_RS06395	0.47	+2.5
1,402,089	-		RR42_RS06395	0.48	-0.7
1,402,170	-		RR42_RS06395	0.61	+2.3
1,402,187	+		RR42_RS06395	0.64	+0.8
1,402,188	-		RR42_RS06395	0.64	-0.2
1,402,265	+		RR42_RS06395	0.77	-0.1
1,402,266	-		RR42_RS06395	0.77	+1.1
1,402,266	-		RR42_RS06395	0.77	+1.8
1,402,301	+		RR42_RS06395	0.83	-1.0
1,402,301	+		RR42_RS06395	0.83	-2.3
1,402,302	-		RR42_RS06395	0.83	+0.3
1,402,307	+		RR42_RS06395	0.84	+3.0
1,402,538	-				+2.0
1,402,611	+				-4.1
1,402,612	-				-0.3
1,402,713	+				-0.9
1,402,713	+				-1.3
1,402,714	-				-1.8
1,402,714	-				-0.1
1,402,714	-				-0.9
1,402,714	-				-1.3
1,402,714	-				-1.8