Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05980

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,313,648	+				+0.5
1,313,927	-		RR42_RS05975	0.42	-0.2
1,314,071	+		RR42_RS05975	0.59	-0.5
1,314,071	+		RR42_RS05975	0.59	-2.1
1,314,310	+		RR42_RS05975	0.88	-0.4
1,314,744	+		RR42_RS05980	0.24	-1.1
1,314,744	+		RR42_RS05980	0.24	+0.5
1,314,744	+		RR42_RS05980	0.24	-2.7
1,314,744	+		RR42_RS05980	0.24	-0.7
1,314,745	-		RR42_RS05980	0.24	-0.3
1,314,745	-		RR42_RS05980	0.24	+0.3
1,314,747	+		RR42_RS05980	0.24	+0.7
1,314,747	+		RR42_RS05980	0.24	-0.3
1,314,747	+		RR42_RS05980	0.24	+0.5
1,314,748	-		RR42_RS05980	0.24	-2.9
1,314,751	-		RR42_RS05980	0.25	-0.9
1,314,753	+		RR42_RS05980	0.25	-1.9
1,314,753	+		RR42_RS05980	0.25	-3.8
1,315,075	+		RR42_RS05980	0.76	-2.3
1,315,077	+		RR42_RS05980	0.76	-3.4
1,315,078	-		RR42_RS05980	0.76	-3.5
1,315,078	-		RR42_RS05980	0.76	+0.2
1,315,078	-		RR42_RS05980	0.76	-1.6
1,315,101	+		RR42_RS05980	0.80	+1.7
1,315,102	-		RR42_RS05980	0.80	-2.2
1,315,104	+		RR42_RS05980	0.80	-1.2
1,315,104	+		RR42_RS05980	0.80	+3.4
1,315,104	+		RR42_RS05980	0.80	-3.8
1,315,105	-		RR42_RS05980	0.80	-1.2
1,315,297	-				-1.5
1,315,616	+		RR42_RS05985	0.25	+1.5
1,315,650	-		RR42_RS05985	0.27	-2.8
1,315,658	+		RR42_RS05985	0.28	+0.5
1,315,658	+		RR42_RS05985	0.28	-1.8
1,315,712	+		RR42_RS05985	0.32	+2.0
1,315,712	+		RR42_RS05985	0.32	-3.5
1,315,712	+		RR42_RS05985	0.32	-1.9
1,315,713	-		RR42_RS05985	0.33	+0.9
1,315,715	+		RR42_RS05985	0.33	-2.2
1,315,716	-		RR42_RS05985	0.33	-3.0
1,315,716	-		RR42_RS05985	0.33	-3.7
1,315,721	+		RR42_RS05985	0.33	+0.3
1,315,788	-		RR42_RS05985	0.39	-1.0
1,315,788	-		RR42_RS05985	0.39	-2.5
1,315,812	-		RR42_RS05985	0.40	-1.1
1,315,827	+		RR42_RS05985	0.42	-0.6
1,315,827	+		RR42_RS05985	0.42	+1.9
1,315,830	-		RR42_RS05985	0.42	-0.1
1,315,996	-		RR42_RS05985	0.55	+0.4
1,315,996	-		RR42_RS05985	0.55	-2.2
1,315,996	-		RR42_RS05985	0.55	+1.6
1,316,060	+		RR42_RS05985	0.60	-1.5
1,316,060	+		RR42_RS05985	0.60	+0.5
1,316,060	+		RR42_RS05985	0.60	-3.5
1,316,060	+		RR42_RS05985	0.60	+2.1
1,316,061	-		RR42_RS05985	0.61	+2.7
1,316,061	-		RR42_RS05985	0.61	+1.6
1,316,061	-		RR42_RS05985	0.61	-2.8
1,316,061	-		RR42_RS05985	0.61	+1.9
1,316,069	+		RR42_RS05985	0.61	-0.4
1,316,069	+		RR42_RS05985	0.61	+0.7
1,316,070	-		RR42_RS05985	0.61	-2.9
1,316,135	+		RR42_RS05985	0.67	-2.2
1,316,135	+		RR42_RS05985	0.67	-0.3
1,316,135	+		RR42_RS05985	0.67	-0.4
1,316,135	+		RR42_RS05985	0.67	-0.2
1,316,135	+		RR42_RS05985	0.67	-2.3
1,316,135	+		RR42_RS05985	0.67	+1.4
1,316,136	-		RR42_RS05985	0.67	-0.6