Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04885

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,083,105	+		RR42_RS04880	0.22	+1.2
1,083,105	+		RR42_RS04880	0.22	-0.6
1,083,107	+		RR42_RS04880	0.22	+0.1
1,083,108	-		RR42_RS04880	0.22	+0.2
1,083,108	-		RR42_RS04880	0.22	+1.9
1,083,194	+		RR42_RS04880	0.29	-1.5
1,083,195	-		RR42_RS04880	0.29	-0.5
1,083,212	+		RR42_RS04880	0.31	+0.3
1,083,267	-		RR42_RS04880	0.35	+1.1
1,083,275	+		RR42_RS04880	0.36	+0.1
1,083,320	+		RR42_RS04880	0.39	-1.2
1,083,320	+		RR42_RS04880	0.39	-1.2
1,083,320	+		RR42_RS04880	0.39	-1.6
1,083,320	+		RR42_RS04880	0.39	+0.8
1,083,392	+		RR42_RS04880	0.45	-0.9
1,083,393	-		RR42_RS04880	0.45	-0.2
1,083,393	-		RR42_RS04880	0.45	+0.4
1,083,477	-		RR42_RS04880	0.52	+0.3
1,083,809	-		RR42_RS04880	0.78	-0.6
1,083,854	+		RR42_RS04880	0.82	+0.4
1,083,920	+		RR42_RS04880	0.87	+0.1
1,083,949	-		RR42_RS04880	0.90	+0.3
1,083,957	-				-2.8
1,084,222	+		RR42_RS04885	0.24	-1.5
1,084,333	+		RR42_RS04885	0.42	-1.3
1,084,333	+		RR42_RS04885	0.42	-1.2
1,084,334	-		RR42_RS04885	0.42	-1.6
1,084,334	-		RR42_RS04885	0.42	-1.2
1,084,336	+		RR42_RS04885	0.42	-4.4
1,084,336	+		RR42_RS04885	0.42	-2.1
1,084,337	-		RR42_RS04885	0.43	-1.2
1,084,337	-		RR42_RS04885	0.43	+1.0
1,084,337	-		RR42_RS04885	0.43	-0.2
1,084,337	-		RR42_RS04885	0.43	-1.2
1,084,337	-		RR42_RS04885	0.43	+0.8
1,084,339	+		RR42_RS04885	0.43	-2.1
1,084,340	-		RR42_RS04885	0.43	+0.7
1,084,340	-		RR42_RS04885	0.43	-2.9
1,084,442	-		RR42_RS04885	0.60	-0.1
1,084,704	-				+0.4
1,084,895	+		RR42_RS04890	0.26	-0.8
1,084,896	-		RR42_RS04890	0.27	-1.2
1,085,238	-		RR42_RS04890	0.74	-2.2
1,085,366	+				+0.9
1,085,366	+				-0.6
1,085,367	-				-1.7
1,085,385	+				+0.3
1,085,385	+				-2.7