Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04735
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,053,900 | - | +0.5 | |||
1,054,482 | - | RR42_RS04735 | 0.66 | -4.4 | |
1,054,699 | - | -2.6 | |||
1,054,830 | - | -0.4 | |||
1,054,830 | - | -2.0 | |||
1,054,830 | - | +2.0 | |||
1,054,830 | - | +2.4 | |||
1,054,830 | - | -1.4 | |||
1,054,863 | - | +0.8 | |||
1,054,863 | - | +2.0 | |||
1,054,880 | - | +0.8 | |||
1,055,461 | + | RR42_RS04740 | 0.31 | +0.7 | |
1,055,461 | + | RR42_RS04740 | 0.31 | -2.7 | |
1,055,461 | + | RR42_RS04740 | 0.31 | +0.1 | |
1,055,461 | + | RR42_RS04740 | 0.31 | -2.6 | |
1,055,462 | - | RR42_RS04740 | 0.31 | -3.1 | |
1,055,497 | + | RR42_RS04740 | 0.33 | +0.0 | |
1,055,684 | - | RR42_RS04740 | 0.45 | -2.2 | |
1,055,684 | - | RR42_RS04740 | 0.45 | -2.2 |
Or see this region's nucleotide sequence