Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04565

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,017,646	-		RR42_RS04555	0.78	+1.8
1,017,646	-		RR42_RS04555	0.78	+1.5
1,017,646	-		RR42_RS04555	0.78	-1.2
1,017,740	+		RR42_RS04555	0.87	-1.2
1,017,740	+		RR42_RS04555	0.87	+2.9
1,017,741	-		RR42_RS04555	0.87	-1.5
1,017,741	-		RR42_RS04555	0.87	+1.9
1,017,741	-		RR42_RS04555	0.87	-3.4
1,017,825	+				+0.7
1,017,825	+				+2.4
1,017,826	-				+1.0
1,018,415	-		RR42_RS04560	0.84	+0.1
1,018,415	-		RR42_RS04560	0.84	-2.8
1,018,415	-		RR42_RS04560	0.84	+0.9
1,018,415	-		RR42_RS04560	0.84	-1.3
1,018,415	-		RR42_RS04560	0.84	-2.3
1,018,512	+				-3.1
1,018,516	+				-1.2
1,018,516	+				-0.0
1,018,516	+				-1.7
1,018,517	-				-1.0
1,018,517	-				-0.5
1,018,517	-				-2.5
1,018,559	+				-3.0
1,018,559	+				-0.6
1,018,559	+				-0.6
1,018,559	+				-1.4
1,018,559	+				+1.0
1,018,559	+				+1.5
1,018,560	-				+0.1
1,018,560	-				+0.4
1,018,560	-				+0.8
1,018,560	-				-2.1
1,018,560	-				-0.0
1,018,560	-				+1.3
1,018,560	-				-0.9
1,018,597	+				-0.3
1,018,753	+		RR42_RS04565	0.21	-1.5
1,018,754	-		RR42_RS04565	0.21	+0.3
1,018,779	-		RR42_RS04565	0.24	-0.1
1,018,779	-		RR42_RS04565	0.24	-1.9
1,018,829	+		RR42_RS04565	0.30	+1.5
1,018,830	-		RR42_RS04565	0.31	+0.6
1,018,830	-		RR42_RS04565	0.31	+2.0
1,018,830	-		RR42_RS04565	0.31	-2.3
1,018,830	-		RR42_RS04565	0.31	-0.0
1,018,845	-		RR42_RS04565	0.32	+0.8
1,018,922	+		RR42_RS04565	0.42	+1.2
1,018,922	+		RR42_RS04565	0.42	+0.4
1,019,176	+		RR42_RS04565	0.74	-3.4
1,019,176	+		RR42_RS04565	0.74	+1.0
1,019,180	+		RR42_RS04565	0.74	+1.0
1,019,180	+		RR42_RS04565	0.74	+1.0
1,019,181	-		RR42_RS04565	0.75	+0.3
1,019,181	-		RR42_RS04565	0.75	+2.6
1,019,181	-		RR42_RS04565	0.75	-0.5
1,019,181	-		RR42_RS04565	0.75	+2.3
1,019,246	+		RR42_RS04565	0.83	+1.2
1,019,246	+		RR42_RS04565	0.83	+0.5
1,019,247	-		RR42_RS04565	0.83	-0.2
1,019,315	+				+2.6
1,019,315	+				-2.5
1,019,316	-				-1.2
1,019,316	-				-0.5
1,019,340	-				+0.4
1,019,340	-				+0.1
1,019,340	-				-3.9
1,019,340	-				-2.4
1,019,340	-				+0.1
1,019,381	+				+0.8
1,019,382	-				-0.7
1,019,382	-				+1.0
1,019,462	+				+0.7
1,019,536	+				-2.1
1,019,536	+				-0.7
1,019,536	+				-2.0
1,019,536	+				-3.3
1,019,570	+				+1.4
1,020,351	+				+1.3