Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03830 and RR42_RS03835 are separated by 6 nucleotides RR42_RS03835 and RR42_RS03840 are separated by 112 nucleotides RR42_RS03840 and RR42_RS03845 are separated by 371 nucleotides
RR42_RS03830: RR42_RS03830 - molybdenum ABC transporter ATPase, at 845,407 to 846,129
_RS03830
RR42_RS03835: RR42_RS03835 - molybdate ABC transporter permease, at 846,136 to 846,807
_RS03835
RR42_RS03840: RR42_RS03840 - molybdate ABC transporter substrate-binding protein, at 846,920 to 847,711
_RS03840
RR42_RS03845: RR42_RS03845 - 2', 3'-cyclic nucleotide 2'-phosphodiesterase, at 848,083 to 850,143
_RS03845
Position (kb) 846
847
848 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 846.110 kb on - strand at 846.110 kb on - strand at 846.137 kb on + strand at 846.263 kb on + strand, within RR42_RS03835 at 846.263 kb on + strand, within RR42_RS03835 at 846.264 kb on - strand, within RR42_RS03835 at 846.264 kb on - strand, within RR42_RS03835 at 846.437 kb on - strand, within RR42_RS03835 at 846.550 kb on - strand, within RR42_RS03835 at 846.550 kb on - strand, within RR42_RS03835 at 846.624 kb on - strand, within RR42_RS03835 at 846.624 kb on - strand, within RR42_RS03835 at 846.822 kb on + strand at 846.823 kb on - strand at 846.915 kb on - strand at 846.922 kb on - strand at 846.935 kb on + strand at 847.149 kb on + strand, within RR42_RS03840 at 847.150 kb on - strand, within RR42_RS03840 at 847.237 kb on + strand, within RR42_RS03840 at 847.238 kb on - strand, within RR42_RS03840 at 847.238 kb on - strand, within RR42_RS03840 at 847.238 kb on - strand, within RR42_RS03840 at 847.240 kb on - strand, within RR42_RS03840 at 847.240 kb on - strand, within RR42_RS03840 at 847.542 kb on + strand, within RR42_RS03840 at 847.774 kb on - strand at 847.881 kb on + strand at 847.964 kb on - strand at 847.964 kb on - strand at 847.964 kb on - strand at 847.964 kb on - strand at 847.964 kb on - strand at 847.964 kb on - strand at 848.276 kb on - strand at 848.281 kb on + strand at 848.416 kb on + strand, within RR42_RS03845 at 848.417 kb on - strand, within RR42_RS03845 at 848.464 kb on + strand, within RR42_RS03845 at 848.464 kb on + strand, within RR42_RS03845 at 848.464 kb on + strand, within RR42_RS03845 at 848.465 kb on - strand, within RR42_RS03845 at 848.465 kb on - strand, within RR42_RS03845 at 848.465 kb on - strand, within RR42_RS03845 at 848.465 kb on - strand, within RR42_RS03845 at 848.465 kb on - strand, within RR42_RS03845 at 848.525 kb on - strand, within RR42_RS03845 at 848.525 kb on - strand, within RR42_RS03845 at 848.536 kb on + strand, within RR42_RS03845 at 848.644 kb on + strand, within RR42_RS03845 at 848.644 kb on + strand, within RR42_RS03845 at 848.645 kb on - strand, within RR42_RS03845 at 848.680 kb on + strand, within RR42_RS03845 at 848.680 kb on + strand, within RR42_RS03845 at 848.680 kb on + strand, within RR42_RS03845
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 846,110 - -0.6 846,110 - +1.0 846,137 + -0.7 846,263 + RR42_RS03835 0.19 -2.5 846,263 + RR42_RS03835 0.19 +0.3 846,264 - RR42_RS03835 0.19 -2.4 846,264 - RR42_RS03835 0.19 +0.8 846,437 - RR42_RS03835 0.45 -1.9 846,550 - RR42_RS03835 0.62 -3.7 846,550 - RR42_RS03835 0.62 -0.4 846,624 - RR42_RS03835 0.73 -2.0 846,624 - RR42_RS03835 0.73 +0.5 846,822 + -0.5 846,823 - -0.3 846,915 - -0.5 846,922 - -2.7 846,935 + -0.2 847,149 + RR42_RS03840 0.29 +0.2 847,150 - RR42_RS03840 0.29 -0.1 847,237 + RR42_RS03840 0.40 -1.2 847,238 - RR42_RS03840 0.40 -2.6 847,238 - RR42_RS03840 0.40 -0.7 847,238 - RR42_RS03840 0.40 -0.7 847,240 - RR42_RS03840 0.40 -1.2 847,240 - RR42_RS03840 0.40 +0.3 847,542 + RR42_RS03840 0.79 -2.6 847,774 - +1.6 847,881 + +1.1 847,964 - -0.3 847,964 - -2.8 847,964 - +1.5 847,964 - +1.3 847,964 - +2.1 847,964 - -0.1 848,276 - -1.3 848,281 + -0.9 848,416 + RR42_RS03845 0.16 +1.1 848,417 - RR42_RS03845 0.16 +0.6 848,464 + RR42_RS03845 0.18 -0.6 848,464 + RR42_RS03845 0.18 -1.4 848,464 + RR42_RS03845 0.18 +1.1 848,465 - RR42_RS03845 0.19 -3.2 848,465 - RR42_RS03845 0.19 -0.3 848,465 - RR42_RS03845 0.19 -1.0 848,465 - RR42_RS03845 0.19 +1.0 848,465 - RR42_RS03845 0.19 -0.7 848,525 - RR42_RS03845 0.21 -2.1 848,525 - RR42_RS03845 0.21 +0.4 848,536 + RR42_RS03845 0.22 -0.9 848,644 + RR42_RS03845 0.27 -2.0 848,644 + RR42_RS03845 0.27 -0.8 848,645 - RR42_RS03845 0.27 -4.1 848,680 + RR42_RS03845 0.29 +0.2 848,680 + RR42_RS03845 0.29 -0.1 848,680 + RR42_RS03845 0.29 +1.0
Or see this region's nucleotide sequence