Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS03365
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
747,390 | + | RR42_RS03360 | 0.47 | -1.3 | |
747,390 | + | RR42_RS03360 | 0.47 | +1.1 | |
747,390 | + | RR42_RS03360 | 0.47 | -1.4 | |
747,675 | + | RR42_RS03360 | 0.64 | +0.2 | |
748,467 | - | RR42_RS03365 | 0.11 | +3.0 | |
748,875 | - | RR42_RS03365 | 0.52 | +1.6 | |
748,967 | - | RR42_RS03365 | 0.61 | +0.5 | |
749,038 | + | RR42_RS03365 | 0.68 | -4.0 | |
749,039 | - | RR42_RS03365 | 0.68 | -2.0 | |
749,095 | + | RR42_RS03365 | 0.74 | +2.2 | |
749,129 | - | RR42_RS03365 | 0.77 | +1.1 | |
749,278 | + | -0.4 | |||
749,278 | + | -0.2 | |||
749,278 | + | -2.4 | |||
749,554 | + | RR42_RS03370 | 0.16 | +0.9 | |
749,671 | - | RR42_RS03370 | 0.28 | +0.5 | |
750,040 | + | RR42_RS03370 | 0.66 | +1.1 | |
750,346 | + | +0.6 |
Or see this region's nucleotide sequence