Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS00585

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRR42_RS00580 and RR42_RS00585 are separated by 651 nucleotidesRR42_RS00585 and RR42_RS00590 are separated by 95 nucleotides RR42_RS00580: RR42_RS00580 - rod shape-determining protein MreB, at 153,818 to 154,861 _RS00580 RR42_RS00585: RR42_RS00585 - glutamyl-tRNA amidotransferase, at 155,513 to 155,812 _RS00585 RR42_RS00590: RR42_RS00590 - glutamyl-tRNA amidotransferase, at 155,908 to 157,413 _RS00590 Position (kb) 155 156Strain fitness (log2 ratio) -2 -1 0 1 2at 154.951 kb on - strandat 155.137 kb on - strandat 155.380 kb on + strandat 155.381 kb on - strandat 155.382 kb on + strandat 155.382 kb on + strandat 155.810 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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154,951 - -1.3
155,137 - +0.2
155,380 + -2.3
155,381 - +0.2
155,382 + +2.1
155,382 + -1.2
155,810 + -0.8

Or see this region's nucleotide sequence