Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
Pf1N1B4_438 - hypothetical protein, at 518,297 to 519,328
_438
Position (kb) 518
519
520 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 517.585 kb on + strand at 518.005 kb on + strand at 518.061 kb on - strand at 518.061 kb on - strand at 518.266 kb on - strand at 518.311 kb on + strand at 518.484 kb on + strand, within Pf1N1B4_438 at 518.593 kb on - strand, within Pf1N1B4_438 at 518.637 kb on - strand at 518.664 kb on + strand, within Pf1N1B4_438 at 518.665 kb on - strand, within Pf1N1B4_438 at 518.826 kb on - strand at 518.826 kb on - strand, within Pf1N1B4_438 at 518.839 kb on - strand at 518.993 kb on + strand, within Pf1N1B4_438 at 518.994 kb on - strand, within Pf1N1B4_438 at 518.994 kb on - strand, within Pf1N1B4_438 at 519.024 kb on - strand, within Pf1N1B4_438 at 519.077 kb on - strand, within Pf1N1B4_438 at 519.114 kb on - strand, within Pf1N1B4_438 at 519.114 kb on - strand, within Pf1N1B4_438 at 519.212 kb on + strand, within Pf1N1B4_438 at 519.213 kb on - strand, within Pf1N1B4_438 at 519.318 kb on - strand at 519.318 kb on - strand at 519.318 kb on - strand at 519.324 kb on + strand at 519.325 kb on - strand at 519.325 kb on - strand at 519.325 kb on - strand at 519.325 kb on - strand at 519.325 kb on - strand at 519.330 kb on + strand at 519.331 kb on - strand at 519.352 kb on - strand at 519.403 kb on - strand at 519.419 kb on + strand at 519.420 kb on - strand at 519.420 kb on - strand at 519.420 kb on - strand at 519.464 kb on + strand at 519.465 kb on - strand at 519.497 kb on - strand at 519.497 kb on - strand at 519.688 kb on - strand at 520.080 kb on + strand at 520.252 kb on + strand at 520.288 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 517,585 + -0.1 518,005 + +1.7 518,061 - -0.7 518,061 - -0.1 518,266 - -1.4 518,311 + +1.7 518,484 + Pf1N1B4_438 0.18 +0.1 518,593 - Pf1N1B4_438 0.29 -0.5 518,637 - -0.1 518,664 + Pf1N1B4_438 0.36 +1.9 518,665 - Pf1N1B4_438 0.36 +0.5 518,826 - -0.1 518,826 - Pf1N1B4_438 0.51 -1.1 518,839 - +0.9 518,993 + Pf1N1B4_438 0.67 +0.5 518,994 - Pf1N1B4_438 0.68 -2.9 518,994 - Pf1N1B4_438 0.68 -1.9 519,024 - Pf1N1B4_438 0.70 -1.1 519,077 - Pf1N1B4_438 0.76 -1.1 519,114 - Pf1N1B4_438 0.79 +0.9 519,114 - Pf1N1B4_438 0.79 -1.4 519,212 + Pf1N1B4_438 0.89 -1.2 519,213 - Pf1N1B4_438 0.89 -3.1 519,318 - -1.1 519,318 - +1.9 519,318 - -0.1 519,324 + +0.9 519,325 - +1.9 519,325 - +1.2 519,325 - -0.1 519,325 - +1.5 519,325 - -0.1 519,330 + +0.9 519,331 - +0.3 519,352 - -0.1 519,403 - -1.7 519,419 + +0.9 519,420 - -0.4 519,420 - +0.0 519,420 - +0.2 519,464 + +1.5 519,465 - +0.5 519,497 - -1.7 519,497 - -1.1 519,688 - -0.7 520,080 + -1.7 520,252 + -0.1 520,288 - -0.3
Or see this region's nucleotide sequence