Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4810 and Ac3H11_4811 are separated by 405 nucleotides Ac3H11_4811 and Ac3H11_4812 are separated by 4 nucleotides
Ac3H11_4810 - probable response regulator, at 112,446 to 114,143
_4810
Ac3H11_4811 - Endonuclease/exonuclease/phosphatase, at 114,549 to 115,286
_4811
Ac3H11_4812 - Cardiolipin synthetase (EC 2.7.8.-), at 115,291 to 116,529
_4812
Position (kb)
114
115
116 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 113.680 kb on + strand, within Ac3H11_4810 at 113.680 kb on + strand, within Ac3H11_4810 at 113.680 kb on + strand, within Ac3H11_4810 at 113.680 kb on + strand, within Ac3H11_4810 at 113.680 kb on + strand, within Ac3H11_4810 at 113.681 kb on - strand, within Ac3H11_4810 at 113.681 kb on - strand, within Ac3H11_4810 at 113.715 kb on + strand, within Ac3H11_4810 at 113.715 kb on + strand, within Ac3H11_4810 at 113.716 kb on - strand, within Ac3H11_4810 at 113.716 kb on - strand, within Ac3H11_4810 at 113.716 kb on - strand, within Ac3H11_4810 at 113.848 kb on + strand, within Ac3H11_4810 at 113.849 kb on - strand, within Ac3H11_4810 at 113.849 kb on - strand, within Ac3H11_4810 at 113.891 kb on - strand, within Ac3H11_4810 at 113.981 kb on - strand at 113.981 kb on - strand at 114.016 kb on + strand at 114.016 kb on + strand at 114.016 kb on + strand at 114.017 kb on - strand at 114.091 kb on + strand at 114.212 kb on + strand at 114.212 kb on + strand at 114.212 kb on + strand at 114.212 kb on + strand at 114.212 kb on + strand at 114.213 kb on - strand at 114.213 kb on - strand at 114.213 kb on - strand at 114.213 kb on - strand at 114.213 kb on - strand at 114.213 kb on - strand at 114.213 kb on - strand at 114.241 kb on + strand at 114.241 kb on + strand at 114.314 kb on + strand at 114.315 kb on - strand at 114.315 kb on - strand at 114.361 kb on + strand at 114.362 kb on - strand at 114.409 kb on + strand at 114.410 kb on - strand at 114.410 kb on - strand at 114.410 kb on - strand at 114.533 kb on + strand at 114.534 kb on - strand at 114.542 kb on + strand at 114.543 kb on - strand at 114.582 kb on + strand at 114.582 kb on + strand at 114.582 kb on + strand at 114.582 kb on + strand at 114.583 kb on - strand at 114.583 kb on - strand at 114.583 kb on - strand at 114.583 kb on - strand at 114.583 kb on - strand at 114.583 kb on - strand at 114.583 kb on - strand at 114.583 kb on - strand at 114.723 kb on + strand, within Ac3H11_4811 at 114.777 kb on + strand, within Ac3H11_4811 at 114.777 kb on + strand, within Ac3H11_4811 at 114.778 kb on - strand, within Ac3H11_4811 at 114.790 kb on - strand, within Ac3H11_4811 at 114.806 kb on + strand, within Ac3H11_4811 at 115.116 kb on + strand, within Ac3H11_4811 at 115.146 kb on + strand, within Ac3H11_4811 at 115.146 kb on + strand, within Ac3H11_4811 at 115.147 kb on - strand, within Ac3H11_4811 at 115.147 kb on - strand, within Ac3H11_4811 at 115.185 kb on + strand, within Ac3H11_4811 at 115.185 kb on + strand, within Ac3H11_4811 at 115.185 kb on + strand, within Ac3H11_4811 at 115.185 kb on + strand, within Ac3H11_4811 at 115.185 kb on + strand, within Ac3H11_4811 at 115.185 kb on + strand, within Ac3H11_4811 at 115.186 kb on - strand, within Ac3H11_4811 at 115.186 kb on - strand, within Ac3H11_4811 at 115.186 kb on - strand, within Ac3H11_4811 at 115.186 kb on - strand, within Ac3H11_4811 at 115.432 kb on + strand, within Ac3H11_4812 at 115.432 kb on + strand, within Ac3H11_4812 at 115.432 kb on + strand, within Ac3H11_4812 at 115.433 kb on - strand, within Ac3H11_4812 at 115.433 kb on - strand, within Ac3H11_4812 at 115.433 kb on - strand, within Ac3H11_4812 at 115.433 kb on - strand, within Ac3H11_4812 at 115.433 kb on - strand, within Ac3H11_4812 at 115.588 kb on + strand, within Ac3H11_4812 at 115.588 kb on + strand, within Ac3H11_4812 at 115.588 kb on + strand, within Ac3H11_4812 at 115.589 kb on - strand, within Ac3H11_4812 at 115.589 kb on - strand, within Ac3H11_4812 at 115.597 kb on + strand, within Ac3H11_4812 at 115.597 kb on + strand, within Ac3H11_4812 at 115.597 kb on + strand, within Ac3H11_4812 at 115.598 kb on - strand, within Ac3H11_4812 at 115.598 kb on - strand, within Ac3H11_4812 at 116.005 kb on + strand, within Ac3H11_4812 at 116.056 kb on + strand, within Ac3H11_4812 at 116.056 kb on + strand, within Ac3H11_4812 at 116.057 kb on - strand, within Ac3H11_4812 at 116.143 kb on + strand, within Ac3H11_4812 at 116.143 kb on + strand, within Ac3H11_4812 at 116.149 kb on + strand, within Ac3H11_4812 at 116.149 kb on + strand, within Ac3H11_4812 at 116.150 kb on - strand, within Ac3H11_4812 at 116.150 kb on - strand, within Ac3H11_4812 at 116.150 kb on - strand, within Ac3H11_4812 at 116.150 kb on - strand, within Ac3H11_4812 at 116.161 kb on + strand, within Ac3H11_4812 at 116.162 kb on - strand, within Ac3H11_4812 at 116.183 kb on - strand, within Ac3H11_4812 at 116.183 kb on - strand, within Ac3H11_4812 at 116.215 kb on + strand, within Ac3H11_4812 at 116.216 kb on - strand, within Ac3H11_4812 at 116.216 kb on - strand, within Ac3H11_4812 at 116.216 kb on - strand, within Ac3H11_4812 at 116.221 kb on + strand, within Ac3H11_4812 at 116.222 kb on - strand, within Ac3H11_4812 at 116.222 kb on - strand, within Ac3H11_4812 at 116.222 kb on - strand, within Ac3H11_4812
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 113,680 + Ac3H11_4810 0.73 +0.4 113,680 + Ac3H11_4810 0.73 +0.2 113,680 + Ac3H11_4810 0.73 -1.4 113,680 + Ac3H11_4810 0.73 +0.1 113,680 + Ac3H11_4810 0.73 +0.3 113,681 - Ac3H11_4810 0.73 -0.6 113,681 - Ac3H11_4810 0.73 -0.6 113,715 + Ac3H11_4810 0.75 -0.4 113,715 + Ac3H11_4810 0.75 -0.4 113,716 - Ac3H11_4810 0.75 +0.1 113,716 - Ac3H11_4810 0.75 -1.4 113,716 - Ac3H11_4810 0.75 +0.2 113,848 + Ac3H11_4810 0.83 -0.7 113,849 - Ac3H11_4810 0.83 -1.7 113,849 - Ac3H11_4810 0.83 +0.7 113,891 - Ac3H11_4810 0.85 -0.1 113,981 - -0.3 113,981 - -1.1 114,016 + +0.2 114,016 + -0.3 114,016 + -0.7 114,017 - -0.4 114,091 + -1.7 114,212 + +0.5 114,212 + +0.6 114,212 + -0.1 114,212 + -1.0 114,212 + +0.3 114,213 - +1.0 114,213 - -0.6 114,213 - -0.3 114,213 - -0.5 114,213 - +0.5 114,213 - -0.6 114,213 - -0.7 114,241 + -0.6 114,241 + -0.5 114,314 + +0.9 114,315 - -1.5 114,315 - -0.6 114,361 + -0.2 114,362 - +0.5 114,409 + +1.2 114,410 - -0.3 114,410 - +0.5 114,410 - -0.0 114,533 + -0.7 114,534 - +0.6 114,542 + -0.1 114,543 - +0.9 114,582 + +1.3 114,582 + +0.0 114,582 + +0.6 114,582 + -1.7 114,583 - +0.3 114,583 - +1.5 114,583 - +1.3 114,583 - +0.1 114,583 - +0.1 114,583 - -0.1 114,583 - -0.1 114,583 - -0.5 114,723 + Ac3H11_4811 0.24 +1.3 114,777 + Ac3H11_4811 0.31 -0.1 114,777 + Ac3H11_4811 0.31 +0.6 114,778 - Ac3H11_4811 0.31 +1.2 114,790 - Ac3H11_4811 0.33 -0.3 114,806 + Ac3H11_4811 0.35 +1.0 115,116 + Ac3H11_4811 0.77 +0.8 115,146 + Ac3H11_4811 0.81 -0.1 115,146 + Ac3H11_4811 0.81 -0.4 115,147 - Ac3H11_4811 0.81 +0.4 115,147 - Ac3H11_4811 0.81 +1.1 115,185 + Ac3H11_4811 0.86 +0.1 115,185 + Ac3H11_4811 0.86 +0.1 115,185 + Ac3H11_4811 0.86 +0.3 115,185 + Ac3H11_4811 0.86 +1.4 115,185 + Ac3H11_4811 0.86 +0.5 115,185 + Ac3H11_4811 0.86 -0.2 115,186 - Ac3H11_4811 0.86 +0.7 115,186 - Ac3H11_4811 0.86 +1.8 115,186 - Ac3H11_4811 0.86 +0.0 115,186 - Ac3H11_4811 0.86 -0.5 115,432 + Ac3H11_4812 0.11 -1.2 115,432 + Ac3H11_4812 0.11 +0.1 115,432 + Ac3H11_4812 0.11 -1.8 115,433 - Ac3H11_4812 0.11 -0.3 115,433 - Ac3H11_4812 0.11 +0.4 115,433 - Ac3H11_4812 0.11 +0.2 115,433 - Ac3H11_4812 0.11 +1.1 115,433 - Ac3H11_4812 0.11 +0.6 115,588 + Ac3H11_4812 0.24 -0.9 115,588 + Ac3H11_4812 0.24 +0.3 115,588 + Ac3H11_4812 0.24 -1.1 115,589 - Ac3H11_4812 0.24 -1.0 115,589 - Ac3H11_4812 0.24 +0.3 115,597 + Ac3H11_4812 0.25 -0.5 115,597 + Ac3H11_4812 0.25 +0.5 115,597 + Ac3H11_4812 0.25 -0.4 115,598 - Ac3H11_4812 0.25 -0.5 115,598 - Ac3H11_4812 0.25 -0.3 116,005 + Ac3H11_4812 0.58 -0.7 116,056 + Ac3H11_4812 0.62 +0.6 116,056 + Ac3H11_4812 0.62 +0.7 116,057 - Ac3H11_4812 0.62 +0.2 116,143 + Ac3H11_4812 0.69 -0.2 116,143 + Ac3H11_4812 0.69 -0.4 116,149 + Ac3H11_4812 0.69 +2.3 116,149 + Ac3H11_4812 0.69 +0.3 116,150 - Ac3H11_4812 0.69 +0.3 116,150 - Ac3H11_4812 0.69 +0.7 116,150 - Ac3H11_4812 0.69 +0.8 116,150 - Ac3H11_4812 0.69 +1.4 116,161 + Ac3H11_4812 0.70 -0.5 116,162 - Ac3H11_4812 0.70 +0.3 116,183 - Ac3H11_4812 0.72 -0.5 116,183 - Ac3H11_4812 0.72 +0.3 116,215 + Ac3H11_4812 0.75 +1.1 116,216 - Ac3H11_4812 0.75 -1.1 116,216 - Ac3H11_4812 0.75 -0.4 116,216 - Ac3H11_4812 0.75 -0.2 116,221 + Ac3H11_4812 0.75 -0.3 116,222 - Ac3H11_4812 0.75 +0.4 116,222 - Ac3H11_4812 0.75 +0.5 116,222 - Ac3H11_4812 0.75 +0.0
Or see this region's nucleotide sequence