Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4811

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_4810 and Ac3H11_4811 are separated by 405 nucleotidesAc3H11_4811 and Ac3H11_4812 are separated by 4 nucleotides Ac3H11_4810 - probable response regulator, at 112,446 to 114,143 _4810 Ac3H11_4811 - Endonuclease/exonuclease/phosphatase, at 114,549 to 115,286 _4811 Ac3H11_4812 - Cardiolipin synthetase (EC 2.7.8.-), at 115,291 to 116,529 _4812 Position (kb) 114 115 116Strain fitness (log2 ratio) -2 -1 0 1 2at 113.680 kb on + strand, within Ac3H11_4810at 113.680 kb on + strand, within Ac3H11_4810at 113.680 kb on + strand, within Ac3H11_4810at 113.680 kb on + strand, within Ac3H11_4810at 113.680 kb on + strand, within Ac3H11_4810at 113.681 kb on - strand, within Ac3H11_4810at 113.681 kb on - strand, within Ac3H11_4810at 113.715 kb on + strand, within Ac3H11_4810at 113.715 kb on + strand, within Ac3H11_4810at 113.716 kb on - strand, within Ac3H11_4810at 113.716 kb on - strand, within Ac3H11_4810at 113.716 kb on - strand, within Ac3H11_4810at 113.848 kb on + strand, within Ac3H11_4810at 113.849 kb on - strand, within Ac3H11_4810at 113.849 kb on - strand, within Ac3H11_4810at 113.891 kb on - strand, within Ac3H11_4810at 113.981 kb on - strandat 113.981 kb on - strandat 114.016 kb on + strandat 114.016 kb on + strandat 114.016 kb on + strandat 114.017 kb on - strandat 114.091 kb on + strandat 114.212 kb on + strandat 114.212 kb on + strandat 114.212 kb on + strandat 114.212 kb on + strandat 114.212 kb on + strandat 114.213 kb on - strandat 114.213 kb on - strandat 114.213 kb on - strandat 114.213 kb on - strandat 114.213 kb on - strandat 114.213 kb on - strandat 114.213 kb on - strandat 114.241 kb on + strandat 114.241 kb on + strandat 114.314 kb on + strandat 114.315 kb on - strandat 114.315 kb on - strandat 114.361 kb on + strandat 114.362 kb on - strandat 114.409 kb on + strandat 114.410 kb on - strandat 114.410 kb on - strandat 114.410 kb on - strandat 114.533 kb on + strandat 114.534 kb on - strandat 114.542 kb on + strandat 114.543 kb on - strandat 114.582 kb on + strandat 114.582 kb on + strandat 114.582 kb on + strandat 114.582 kb on + strandat 114.583 kb on - strandat 114.583 kb on - strandat 114.583 kb on - strandat 114.583 kb on - strandat 114.583 kb on - strandat 114.583 kb on - strandat 114.583 kb on - strandat 114.583 kb on - strandat 114.723 kb on + strand, within Ac3H11_4811at 114.777 kb on + strand, within Ac3H11_4811at 114.777 kb on + strand, within Ac3H11_4811at 114.778 kb on - strand, within Ac3H11_4811at 114.790 kb on - strand, within Ac3H11_4811at 114.806 kb on + strand, within Ac3H11_4811at 115.116 kb on + strand, within Ac3H11_4811at 115.146 kb on + strand, within Ac3H11_4811at 115.146 kb on + strand, within Ac3H11_4811at 115.147 kb on - strand, within Ac3H11_4811at 115.147 kb on - strand, within Ac3H11_4811at 115.185 kb on + strand, within Ac3H11_4811at 115.185 kb on + strand, within Ac3H11_4811at 115.185 kb on + strand, within Ac3H11_4811at 115.185 kb on + strand, within Ac3H11_4811at 115.185 kb on + strand, within Ac3H11_4811at 115.185 kb on + strand, within Ac3H11_4811at 115.186 kb on - strand, within Ac3H11_4811at 115.186 kb on - strand, within Ac3H11_4811at 115.186 kb on - strand, within Ac3H11_4811at 115.186 kb on - strand, within Ac3H11_4811at 115.432 kb on + strand, within Ac3H11_4812at 115.432 kb on + strand, within Ac3H11_4812at 115.432 kb on + strand, within Ac3H11_4812at 115.433 kb on - strand, within Ac3H11_4812at 115.433 kb on - strand, within Ac3H11_4812at 115.433 kb on - strand, within Ac3H11_4812at 115.433 kb on - strand, within Ac3H11_4812at 115.433 kb on - strand, within Ac3H11_4812at 115.588 kb on + strand, within Ac3H11_4812at 115.588 kb on + strand, within Ac3H11_4812at 115.588 kb on + strand, within Ac3H11_4812at 115.589 kb on - strand, within Ac3H11_4812at 115.589 kb on - strand, within Ac3H11_4812at 115.597 kb on + strand, within Ac3H11_4812at 115.597 kb on + strand, within Ac3H11_4812at 115.597 kb on + strand, within Ac3H11_4812at 115.598 kb on - strand, within Ac3H11_4812at 115.598 kb on - strand, within Ac3H11_4812at 116.005 kb on + strand, within Ac3H11_4812at 116.056 kb on + strand, within Ac3H11_4812at 116.056 kb on + strand, within Ac3H11_4812at 116.057 kb on - strand, within Ac3H11_4812at 116.143 kb on + strand, within Ac3H11_4812at 116.143 kb on + strand, within Ac3H11_4812at 116.149 kb on + strand, within Ac3H11_4812at 116.149 kb on + strand, within Ac3H11_4812at 116.150 kb on - strand, within Ac3H11_4812at 116.150 kb on - strand, within Ac3H11_4812at 116.150 kb on - strand, within Ac3H11_4812at 116.150 kb on - strand, within Ac3H11_4812at 116.161 kb on + strand, within Ac3H11_4812at 116.162 kb on - strand, within Ac3H11_4812at 116.183 kb on - strand, within Ac3H11_4812at 116.183 kb on - strand, within Ac3H11_4812at 116.215 kb on + strand, within Ac3H11_4812at 116.216 kb on - strand, within Ac3H11_4812at 116.216 kb on - strand, within Ac3H11_4812at 116.216 kb on - strand, within Ac3H11_4812at 116.221 kb on + strand, within Ac3H11_4812at 116.222 kb on - strand, within Ac3H11_4812at 116.222 kb on - strand, within Ac3H11_4812at 116.222 kb on - strand, within Ac3H11_4812

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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113,680 + Ac3H11_4810 0.73 +0.4
113,680 + Ac3H11_4810 0.73 +0.2
113,680 + Ac3H11_4810 0.73 -1.4
113,680 + Ac3H11_4810 0.73 +0.1
113,680 + Ac3H11_4810 0.73 +0.3
113,681 - Ac3H11_4810 0.73 -0.6
113,681 - Ac3H11_4810 0.73 -0.6
113,715 + Ac3H11_4810 0.75 -0.4
113,715 + Ac3H11_4810 0.75 -0.4
113,716 - Ac3H11_4810 0.75 +0.1
113,716 - Ac3H11_4810 0.75 -1.4
113,716 - Ac3H11_4810 0.75 +0.2
113,848 + Ac3H11_4810 0.83 -0.7
113,849 - Ac3H11_4810 0.83 -1.7
113,849 - Ac3H11_4810 0.83 +0.7
113,891 - Ac3H11_4810 0.85 -0.1
113,981 - -0.3
113,981 - -1.1
114,016 + +0.2
114,016 + -0.3
114,016 + -0.7
114,017 - -0.4
114,091 + -1.7
114,212 + +0.5
114,212 + +0.6
114,212 + -0.1
114,212 + -1.0
114,212 + +0.3
114,213 - +1.0
114,213 - -0.6
114,213 - -0.3
114,213 - -0.5
114,213 - +0.5
114,213 - -0.6
114,213 - -0.7
114,241 + -0.6
114,241 + -0.5
114,314 + +0.9
114,315 - -1.5
114,315 - -0.6
114,361 + -0.2
114,362 - +0.5
114,409 + +1.2
114,410 - -0.3
114,410 - +0.5
114,410 - -0.0
114,533 + -0.7
114,534 - +0.6
114,542 + -0.1
114,543 - +0.9
114,582 + +1.3
114,582 + +0.0
114,582 + +0.6
114,582 + -1.7
114,583 - +0.3
114,583 - +1.5
114,583 - +1.3
114,583 - +0.1
114,583 - +0.1
114,583 - -0.1
114,583 - -0.1
114,583 - -0.5
114,723 + Ac3H11_4811 0.24 +1.3
114,777 + Ac3H11_4811 0.31 -0.1
114,777 + Ac3H11_4811 0.31 +0.6
114,778 - Ac3H11_4811 0.31 +1.2
114,790 - Ac3H11_4811 0.33 -0.3
114,806 + Ac3H11_4811 0.35 +1.0
115,116 + Ac3H11_4811 0.77 +0.8
115,146 + Ac3H11_4811 0.81 -0.1
115,146 + Ac3H11_4811 0.81 -0.4
115,147 - Ac3H11_4811 0.81 +0.4
115,147 - Ac3H11_4811 0.81 +1.1
115,185 + Ac3H11_4811 0.86 +0.1
115,185 + Ac3H11_4811 0.86 +0.1
115,185 + Ac3H11_4811 0.86 +0.3
115,185 + Ac3H11_4811 0.86 +1.4
115,185 + Ac3H11_4811 0.86 +0.5
115,185 + Ac3H11_4811 0.86 -0.2
115,186 - Ac3H11_4811 0.86 +0.7
115,186 - Ac3H11_4811 0.86 +1.8
115,186 - Ac3H11_4811 0.86 +0.0
115,186 - Ac3H11_4811 0.86 -0.5
115,432 + Ac3H11_4812 0.11 -1.2
115,432 + Ac3H11_4812 0.11 +0.1
115,432 + Ac3H11_4812 0.11 -1.8
115,433 - Ac3H11_4812 0.11 -0.3
115,433 - Ac3H11_4812 0.11 +0.4
115,433 - Ac3H11_4812 0.11 +0.2
115,433 - Ac3H11_4812 0.11 +1.1
115,433 - Ac3H11_4812 0.11 +0.6
115,588 + Ac3H11_4812 0.24 -0.9
115,588 + Ac3H11_4812 0.24 +0.3
115,588 + Ac3H11_4812 0.24 -1.1
115,589 - Ac3H11_4812 0.24 -1.0
115,589 - Ac3H11_4812 0.24 +0.3
115,597 + Ac3H11_4812 0.25 -0.5
115,597 + Ac3H11_4812 0.25 +0.5
115,597 + Ac3H11_4812 0.25 -0.4
115,598 - Ac3H11_4812 0.25 -0.5
115,598 - Ac3H11_4812 0.25 -0.3
116,005 + Ac3H11_4812 0.58 -0.7
116,056 + Ac3H11_4812 0.62 +0.6
116,056 + Ac3H11_4812 0.62 +0.7
116,057 - Ac3H11_4812 0.62 +0.2
116,143 + Ac3H11_4812 0.69 -0.2
116,143 + Ac3H11_4812 0.69 -0.4
116,149 + Ac3H11_4812 0.69 +2.3
116,149 + Ac3H11_4812 0.69 +0.3
116,150 - Ac3H11_4812 0.69 +0.3
116,150 - Ac3H11_4812 0.69 +0.7
116,150 - Ac3H11_4812 0.69 +0.8
116,150 - Ac3H11_4812 0.69 +1.4
116,161 + Ac3H11_4812 0.70 -0.5
116,162 - Ac3H11_4812 0.70 +0.3
116,183 - Ac3H11_4812 0.72 -0.5
116,183 - Ac3H11_4812 0.72 +0.3
116,215 + Ac3H11_4812 0.75 +1.1
116,216 - Ac3H11_4812 0.75 -1.1
116,216 - Ac3H11_4812 0.75 -0.4
116,216 - Ac3H11_4812 0.75 -0.2
116,221 + Ac3H11_4812 0.75 -0.3
116,222 - Ac3H11_4812 0.75 +0.4
116,222 - Ac3H11_4812 0.75 +0.5
116,222 - Ac3H11_4812 0.75 +0.0

Or see this region's nucleotide sequence