Experiment: Furfuryl Alcohol 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_29055 and AO353_29060 are separated by 144 nucleotides AO353_29060 and AO353_29065 are separated by 9 nucleotides AO353_29065 and AO353_29070 are separated by 148 nucleotides
AO353_29055: AO353_29055 - peptidoglycan-binding protein, at 6,315,397 to 6,316,968
_29055
AO353_29060: AO353_29060 - hypothetical protein, at 6,317,113 to 6,317,826
_29060
AO353_29065: AO353_29065 - reactive intermediate/imine deaminase, at 6,317,836 to 6,318,216
_29065
AO353_29070: AO353_29070 - diguanylate cyclase, at 6,318,365 to 6,319,996
_29070
Position (kb)
6317
6318 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6316.253 kb on + strand, within AO353_29055 at 6316.253 kb on + strand, within AO353_29055 at 6316.254 kb on - strand, within AO353_29055 at 6316.254 kb on - strand, within AO353_29055 at 6316.254 kb on - strand, within AO353_29055 at 6316.289 kb on + strand, within AO353_29055 at 6316.290 kb on - strand, within AO353_29055 at 6316.290 kb on - strand, within AO353_29055 at 6316.351 kb on + strand, within AO353_29055 at 6316.351 kb on + strand, within AO353_29055 at 6316.351 kb on + strand, within AO353_29055 at 6316.351 kb on + strand, within AO353_29055 at 6316.351 kb on + strand, within AO353_29055 at 6316.351 kb on + strand, within AO353_29055 at 6316.412 kb on + strand, within AO353_29055 at 6316.413 kb on - strand, within AO353_29055 at 6316.413 kb on - strand, within AO353_29055 at 6316.413 kb on - strand, within AO353_29055 at 6316.434 kb on - strand, within AO353_29055 at 6316.610 kb on + strand, within AO353_29055 at 6316.766 kb on + strand, within AO353_29055 at 6316.766 kb on + strand, within AO353_29055 at 6316.766 kb on + strand, within AO353_29055 at 6316.767 kb on - strand, within AO353_29055 at 6316.767 kb on - strand, within AO353_29055 at 6316.767 kb on - strand, within AO353_29055 at 6316.767 kb on - strand, within AO353_29055 at 6316.767 kb on - strand, within AO353_29055 at 6316.767 kb on - strand, within AO353_29055 at 6316.782 kb on - strand, within AO353_29055 at 6316.782 kb on - strand, within AO353_29055 at 6316.946 kb on + strand at 6316.946 kb on + strand at 6316.946 kb on + strand at 6316.946 kb on + strand at 6316.946 kb on + strand at 6316.946 kb on + strand at 6316.947 kb on - strand at 6316.947 kb on - strand at 6316.998 kb on + strand at 6316.998 kb on + strand at 6316.999 kb on - strand at 6317.045 kb on + strand at 6317.045 kb on + strand at 6317.045 kb on + strand at 6317.045 kb on + strand at 6317.045 kb on + strand at 6317.046 kb on - strand at 6317.046 kb on - strand at 6317.046 kb on - strand at 6317.046 kb on - strand at 6317.046 kb on - strand at 6317.046 kb on - strand at 6317.046 kb on - strand at 6317.092 kb on + strand at 6317.093 kb on - strand at 6317.127 kb on - strand at 6317.148 kb on + strand at 6317.148 kb on + strand at 6317.148 kb on + strand at 6317.148 kb on + strand at 6317.148 kb on + strand at 6317.148 kb on + strand at 6317.148 kb on + strand at 6317.149 kb on - strand at 6317.149 kb on - strand at 6317.149 kb on - strand at 6317.149 kb on - strand at 6317.149 kb on - strand at 6317.149 kb on - strand at 6317.207 kb on + strand, within AO353_29060 at 6317.207 kb on + strand, within AO353_29060 at 6317.207 kb on + strand, within AO353_29060 at 6317.208 kb on - strand, within AO353_29060 at 6317.208 kb on - strand, within AO353_29060 at 6317.208 kb on - strand, within AO353_29060 at 6317.209 kb on + strand, within AO353_29060 at 6317.209 kb on + strand, within AO353_29060 at 6317.209 kb on + strand, within AO353_29060 at 6317.209 kb on + strand, within AO353_29060 at 6317.209 kb on + strand, within AO353_29060 at 6317.209 kb on + strand, within AO353_29060 at 6317.209 kb on + strand, within AO353_29060 at 6317.209 kb on + strand, within AO353_29060 at 6317.210 kb on - strand, within AO353_29060 at 6317.210 kb on - strand, within AO353_29060 at 6317.210 kb on - strand, within AO353_29060 at 6317.210 kb on - strand, within AO353_29060 at 6317.210 kb on - strand, within AO353_29060 at 6317.210 kb on - strand, within AO353_29060 at 6317.210 kb on - strand, within AO353_29060 at 6317.210 kb on - strand, within AO353_29060 at 6317.211 kb on + strand, within AO353_29060 at 6317.211 kb on + strand, within AO353_29060 at 6317.211 kb on + strand, within AO353_29060 at 6317.211 kb on + strand, within AO353_29060 at 6317.211 kb on + strand, within AO353_29060 at 6317.211 kb on + strand, within AO353_29060 at 6317.212 kb on - strand, within AO353_29060 at 6317.212 kb on - strand, within AO353_29060 at 6317.212 kb on - strand, within AO353_29060 at 6317.212 kb on - strand, within AO353_29060 at 6317.333 kb on - strand, within AO353_29060 at 6317.470 kb on + strand, within AO353_29060 at 6317.470 kb on + strand, within AO353_29060 at 6317.471 kb on - strand, within AO353_29060 at 6317.471 kb on - strand, within AO353_29060 at 6317.509 kb on + strand, within AO353_29060 at 6317.509 kb on + strand, within AO353_29060 at 6317.510 kb on - strand, within AO353_29060 at 6317.528 kb on - strand, within AO353_29060 at 6317.608 kb on + strand, within AO353_29060 at 6317.609 kb on - strand, within AO353_29060 at 6317.703 kb on + strand, within AO353_29060 at 6317.770 kb on + strand at 6317.945 kb on + strand, within AO353_29065 at 6317.945 kb on + strand, within AO353_29065 at 6317.945 kb on + strand, within AO353_29065 at 6317.945 kb on + strand, within AO353_29065 at 6317.945 kb on + strand, within AO353_29065 at 6317.946 kb on - strand, within AO353_29065 at 6317.987 kb on + strand, within AO353_29065 at 6317.987 kb on + strand, within AO353_29065 at 6317.987 kb on + strand, within AO353_29065 at 6317.987 kb on + strand, within AO353_29065 at 6317.988 kb on - strand, within AO353_29065 at 6317.988 kb on - strand, within AO353_29065 at 6317.988 kb on - strand, within AO353_29065 at 6317.988 kb on - strand, within AO353_29065 at 6317.988 kb on - strand, within AO353_29065 at 6317.988 kb on - strand, within AO353_29065 at 6317.988 kb on - strand, within AO353_29065 at 6317.988 kb on - strand, within AO353_29065 at 6318.258 kb on - strand at 6318.273 kb on + strand at 6318.273 kb on + strand at 6318.273 kb on + strand at 6318.273 kb on + strand at 6318.274 kb on - strand at 6318.274 kb on - strand at 6318.274 kb on - strand at 6318.375 kb on + strand at 6318.375 kb on + strand at 6318.375 kb on + strand at 6318.375 kb on + strand at 6318.375 kb on + strand at 6318.375 kb on + strand at 6318.376 kb on - strand at 6318.376 kb on - strand at 6318.376 kb on - strand at 6318.384 kb on + strand at 6318.385 kb on - strand at 6318.385 kb on - strand at 6318.385 kb on - strand at 6318.385 kb on - strand at 6318.414 kb on + strand at 6318.414 kb on + strand at 6318.414 kb on + strand at 6318.414 kb on + strand at 6318.414 kb on + strand at 6318.414 kb on + strand at 6318.414 kb on + strand at 6318.415 kb on - strand at 6318.415 kb on - strand at 6318.415 kb on - strand at 6318.415 kb on - strand at 6318.415 kb on - strand at 6318.446 kb on - strand at 6318.544 kb on + strand, within AO353_29070 at 6318.544 kb on + strand, within AO353_29070 at 6318.544 kb on + strand, within AO353_29070 at 6318.544 kb on + strand, within AO353_29070 at 6318.545 kb on - strand, within AO353_29070 at 6318.545 kb on - strand, within AO353_29070 at 6318.545 kb on - strand, within AO353_29070 at 6318.545 kb on - strand, within AO353_29070 at 6318.545 kb on - strand, within AO353_29070 at 6318.545 kb on - strand, within AO353_29070 at 6318.545 kb on - strand, within AO353_29070 at 6318.545 kb on - strand, within AO353_29070 at 6318.550 kb on + strand, within AO353_29070 at 6318.551 kb on - strand, within AO353_29070 at 6318.551 kb on - strand, within AO353_29070 at 6318.551 kb on - strand, within AO353_29070 at 6318.727 kb on + strand, within AO353_29070 at 6318.727 kb on + strand, within AO353_29070 at 6318.728 kb on - strand, within AO353_29070 at 6318.728 kb on - strand, within AO353_29070 at 6318.728 kb on - strand, within AO353_29070 at 6318.728 kb on - strand, within AO353_29070 at 6318.728 kb on - strand, within AO353_29070 at 6318.728 kb on - strand, within AO353_29070 at 6318.728 kb on - strand, within AO353_29070
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.0625 vol% remove 6,316,253 + AO353_29055 0.54 +1.8 6,316,253 + AO353_29055 0.54 -0.9 6,316,254 - AO353_29055 0.55 -0.2 6,316,254 - AO353_29055 0.55 +0.6 6,316,254 - AO353_29055 0.55 +0.2 6,316,289 + AO353_29055 0.57 +1.2 6,316,290 - AO353_29055 0.57 +0.1 6,316,290 - AO353_29055 0.57 +0.0 6,316,351 + AO353_29055 0.61 -0.2 6,316,351 + AO353_29055 0.61 +0.1 6,316,351 + AO353_29055 0.61 -1.0 6,316,351 + AO353_29055 0.61 +1.9 6,316,351 + AO353_29055 0.61 +1.6 6,316,351 + AO353_29055 0.61 +0.7 6,316,412 + AO353_29055 0.65 +1.6 6,316,413 - AO353_29055 0.65 +1.3 6,316,413 - AO353_29055 0.65 -0.4 6,316,413 - AO353_29055 0.65 -1.0 6,316,434 - AO353_29055 0.66 +0.0 6,316,610 + AO353_29055 0.77 +0.4 6,316,766 + AO353_29055 0.87 +0.9 6,316,766 + AO353_29055 0.87 -1.0 6,316,766 + AO353_29055 0.87 -0.7 6,316,767 - AO353_29055 0.87 -1.8 6,316,767 - AO353_29055 0.87 -0.0 6,316,767 - AO353_29055 0.87 -1.0 6,316,767 - AO353_29055 0.87 -1.6 6,316,767 - AO353_29055 0.87 +0.5 6,316,767 - AO353_29055 0.87 +0.3 6,316,782 - AO353_29055 0.88 -1.0 6,316,782 - AO353_29055 0.88 +0.6 6,316,946 + -1.6 6,316,946 + +0.2 6,316,946 + -0.9 6,316,946 + +0.1 6,316,946 + +1.6 6,316,946 + -0.4 6,316,947 - +1.1 6,316,947 - -0.2 6,316,998 + -0.8 6,316,998 + -0.7 6,316,999 - -0.4 6,317,045 + +2.1 6,317,045 + +1.6 6,317,045 + -1.0 6,317,045 + +1.3 6,317,045 + +0.8 6,317,046 - -0.8 6,317,046 - +0.8 6,317,046 - -0.6 6,317,046 - +0.2 6,317,046 - +0.8 6,317,046 - +1.2 6,317,046 - -3.1 6,317,092 + -0.4 6,317,093 - +0.1 6,317,127 - -0.3 6,317,148 + -0.9 6,317,148 + +1.4 6,317,148 + +0.1 6,317,148 + +1.3 6,317,148 + +1.4 6,317,148 + -1.4 6,317,148 + -1.8 6,317,149 - -0.4 6,317,149 - +2.1 6,317,149 - +0.1 6,317,149 - +0.7 6,317,149 - -1.1 6,317,149 - -0.1 6,317,207 + AO353_29060 0.13 -1.0 6,317,207 + AO353_29060 0.13 +0.6 6,317,207 + AO353_29060 0.13 -0.6 6,317,208 - AO353_29060 0.13 -0.4 6,317,208 - AO353_29060 0.13 +1.0 6,317,208 - AO353_29060 0.13 +0.3 6,317,209 + AO353_29060 0.13 -0.4 6,317,209 + AO353_29060 0.13 +1.1 6,317,209 + AO353_29060 0.13 -1.4 6,317,209 + AO353_29060 0.13 -0.4 6,317,209 + AO353_29060 0.13 +0.2 6,317,209 + AO353_29060 0.13 -1.4 6,317,209 + AO353_29060 0.13 -1.0 6,317,209 + AO353_29060 0.13 -0.1 6,317,210 - AO353_29060 0.14 +0.3 6,317,210 - AO353_29060 0.14 +0.6 6,317,210 - AO353_29060 0.14 -1.8 6,317,210 - AO353_29060 0.14 +0.6 6,317,210 - AO353_29060 0.14 -1.9 6,317,210 - AO353_29060 0.14 +1.0 6,317,210 - AO353_29060 0.14 -0.8 6,317,210 - AO353_29060 0.14 -1.0 6,317,211 + AO353_29060 0.14 -1.0 6,317,211 + AO353_29060 0.14 -0.2 6,317,211 + AO353_29060 0.14 +1.0 6,317,211 + AO353_29060 0.14 -1.4 6,317,211 + AO353_29060 0.14 +0.9 6,317,211 + AO353_29060 0.14 -0.4 6,317,212 - AO353_29060 0.14 -1.6 6,317,212 - AO353_29060 0.14 -2.0 6,317,212 - AO353_29060 0.14 +1.9 6,317,212 - AO353_29060 0.14 -0.8 6,317,333 - AO353_29060 0.31 +0.6 6,317,470 + AO353_29060 0.50 -0.8 6,317,470 + AO353_29060 0.50 -0.3 6,317,471 - AO353_29060 0.50 +0.6 6,317,471 - AO353_29060 0.50 -1.6 6,317,509 + AO353_29060 0.55 -0.9 6,317,509 + AO353_29060 0.55 +1.0 6,317,510 - AO353_29060 0.56 +0.9 6,317,528 - AO353_29060 0.58 -1.2 6,317,608 + AO353_29060 0.69 -0.6 6,317,609 - AO353_29060 0.69 -0.7 6,317,703 + AO353_29060 0.83 -0.9 6,317,770 + +0.9 6,317,945 + AO353_29065 0.29 -0.2 6,317,945 + AO353_29065 0.29 +1.3 6,317,945 + AO353_29065 0.29 +0.5 6,317,945 + AO353_29065 0.29 -0.6 6,317,945 + AO353_29065 0.29 +0.3 6,317,946 - AO353_29065 0.29 -0.4 6,317,987 + AO353_29065 0.40 -0.2 6,317,987 + AO353_29065 0.40 +1.4 6,317,987 + AO353_29065 0.40 -0.0 6,317,987 + AO353_29065 0.40 +0.3 6,317,988 - AO353_29065 0.40 +0.9 6,317,988 - AO353_29065 0.40 -0.6 6,317,988 - AO353_29065 0.40 -0.3 6,317,988 - AO353_29065 0.40 -2.0 6,317,988 - AO353_29065 0.40 +0.2 6,317,988 - AO353_29065 0.40 -1.8 6,317,988 - AO353_29065 0.40 +0.6 6,317,988 - AO353_29065 0.40 -2.0 6,318,258 - -1.8 6,318,273 + +0.8 6,318,273 + -0.7 6,318,273 + -1.4 6,318,273 + -0.7 6,318,274 - +0.2 6,318,274 - +0.6 6,318,274 - -1.0 6,318,375 + -0.2 6,318,375 + +0.3 6,318,375 + +0.8 6,318,375 + -0.6 6,318,375 + -0.8 6,318,375 + -1.0 6,318,376 - +0.8 6,318,376 - +0.1 6,318,376 - -0.2 6,318,384 + +0.1 6,318,385 - -0.8 6,318,385 - -0.4 6,318,385 - -0.7 6,318,385 - -0.4 6,318,414 + -1.4 6,318,414 + +0.1 6,318,414 + -0.0 6,318,414 + +1.6 6,318,414 + +1.0 6,318,414 + -0.3 6,318,414 + +0.3 6,318,415 - +0.6 6,318,415 - +0.6 6,318,415 - -0.0 6,318,415 - +0.7 6,318,415 - -0.1 6,318,446 - +1.6 6,318,544 + AO353_29070 0.11 +0.1 6,318,544 + AO353_29070 0.11 +1.6 6,318,544 + AO353_29070 0.11 +1.0 6,318,544 + AO353_29070 0.11 -0.4 6,318,545 - AO353_29070 0.11 +0.6 6,318,545 - AO353_29070 0.11 +1.2 6,318,545 - AO353_29070 0.11 +0.6 6,318,545 - AO353_29070 0.11 -1.2 6,318,545 - AO353_29070 0.11 +0.1 6,318,545 - AO353_29070 0.11 -0.0 6,318,545 - AO353_29070 0.11 -0.2 6,318,545 - AO353_29070 0.11 -0.8 6,318,550 + AO353_29070 0.11 +0.2 6,318,551 - AO353_29070 0.11 +0.1 6,318,551 - AO353_29070 0.11 -1.0 6,318,551 - AO353_29070 0.11 -2.4 6,318,727 + AO353_29070 0.22 +0.6 6,318,727 + AO353_29070 0.22 -0.2 6,318,728 - AO353_29070 0.22 -0.9 6,318,728 - AO353_29070 0.22 -0.4 6,318,728 - AO353_29070 0.22 +0.9 6,318,728 - AO353_29070 0.22 +0.3 6,318,728 - AO353_29070 0.22 +1.9 6,318,728 - AO353_29070 0.22 +0.8 6,318,728 - AO353_29070 0.22 -0.4
Or see this region's nucleotide sequence