Experiment: Furfuryl Alcohol 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26215 and AO353_26220 overlap by 4 nucleotides AO353_26220 and AO353_26225 are separated by 16 nucleotides AO353_26225 and AO353_26230 are separated by 3 nucleotides AO353_26230 and AO353_26235 are separated by 46 nucleotides
AO353_26215: AO353_26215 - hypothetical protein, at 5,766,033 to 5,766,686
_26215
AO353_26220: AO353_26220 - hypothetical protein, at 5,766,683 to 5,767,054
_26220
AO353_26225: AO353_26225 - hypothetical protein, at 5,767,071 to 5,767,574
_26225
AO353_26230: AO353_26230 - hypothetical protein, at 5,767,578 to 5,767,895
_26230
AO353_26235: AO353_26235 - hypothetical protein, at 5,767,942 to 5,768,907
_26235
Position (kb)
5767
5768 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5766.130 kb on + strand, within AO353_26215 at 5766.169 kb on + strand, within AO353_26215 at 5766.169 kb on + strand, within AO353_26215 at 5766.170 kb on - strand, within AO353_26215 at 5766.170 kb on - strand, within AO353_26215 at 5766.272 kb on + strand, within AO353_26215 at 5766.316 kb on + strand, within AO353_26215 at 5766.388 kb on + strand, within AO353_26215 at 5766.388 kb on + strand, within AO353_26215 at 5766.389 kb on - strand, within AO353_26215 at 5766.389 kb on - strand, within AO353_26215 at 5766.389 kb on - strand, within AO353_26215 at 5766.452 kb on + strand, within AO353_26215 at 5766.453 kb on - strand, within AO353_26215 at 5766.478 kb on + strand, within AO353_26215 at 5766.478 kb on + strand, within AO353_26215 at 5766.479 kb on - strand, within AO353_26215 at 5766.563 kb on + strand, within AO353_26215 at 5766.564 kb on - strand, within AO353_26215 at 5766.676 kb on + strand at 5766.677 kb on - strand at 5766.698 kb on + strand at 5766.698 kb on + strand at 5766.698 kb on + strand at 5766.698 kb on + strand at 5766.698 kb on + strand at 5766.699 kb on - strand at 5766.740 kb on + strand at 5766.740 kb on + strand, within AO353_26220 at 5766.740 kb on + strand, within AO353_26220 at 5766.741 kb on - strand, within AO353_26220 at 5766.946 kb on + strand, within AO353_26220 at 5766.946 kb on + strand, within AO353_26220 at 5766.957 kb on + strand, within AO353_26220 at 5766.958 kb on - strand, within AO353_26220 at 5766.958 kb on - strand, within AO353_26220 at 5767.041 kb on + strand at 5767.041 kb on + strand at 5767.042 kb on - strand at 5767.073 kb on - strand at 5767.105 kb on - strand at 5767.108 kb on + strand at 5767.108 kb on + strand at 5767.109 kb on - strand at 5767.245 kb on + strand, within AO353_26225 at 5767.245 kb on + strand, within AO353_26225 at 5767.245 kb on + strand, within AO353_26225 at 5767.245 kb on + strand, within AO353_26225 at 5767.246 kb on - strand, within AO353_26225 at 5767.319 kb on - strand, within AO353_26225 at 5767.319 kb on - strand, within AO353_26225 at 5767.319 kb on - strand, within AO353_26225 at 5767.319 kb on - strand, within AO353_26225 at 5767.319 kb on - strand, within AO353_26225 at 5767.319 kb on - strand, within AO353_26225 at 5767.475 kb on + strand, within AO353_26225 at 5767.498 kb on + strand, within AO353_26225 at 5767.498 kb on + strand, within AO353_26225 at 5767.499 kb on - strand, within AO353_26225 at 5767.499 kb on - strand, within AO353_26225 at 5767.499 kb on - strand, within AO353_26225 at 5767.525 kb on + strand at 5767.525 kb on + strand at 5767.525 kb on + strand at 5767.525 kb on + strand at 5767.526 kb on - strand at 5767.526 kb on - strand at 5767.579 kb on + strand at 5767.579 kb on + strand at 5767.580 kb on - strand at 5767.580 kb on - strand at 5767.630 kb on + strand, within AO353_26230 at 5767.630 kb on + strand, within AO353_26230 at 5767.631 kb on - strand, within AO353_26230 at 5767.631 kb on - strand, within AO353_26230 at 5767.631 kb on - strand, within AO353_26230 at 5767.756 kb on + strand, within AO353_26230 at 5767.756 kb on + strand, within AO353_26230 at 5767.756 kb on + strand, within AO353_26230 at 5767.756 kb on + strand, within AO353_26230 at 5767.756 kb on + strand, within AO353_26230 at 5767.757 kb on - strand, within AO353_26230 at 5767.827 kb on + strand, within AO353_26230 at 5767.828 kb on - strand, within AO353_26230 at 5767.828 kb on - strand, within AO353_26230 at 5767.839 kb on - strand, within AO353_26230 at 5767.839 kb on - strand, within AO353_26230 at 5767.882 kb on + strand at 5767.882 kb on + strand at 5767.882 kb on + strand at 5767.882 kb on + strand at 5767.883 kb on - strand at 5767.953 kb on + strand at 5767.953 kb on + strand at 5767.954 kb on - strand at 5767.972 kb on + strand at 5767.973 kb on - strand at 5767.973 kb on - strand at 5767.973 kb on - strand at 5768.098 kb on + strand, within AO353_26235 at 5768.098 kb on + strand, within AO353_26235 at 5768.099 kb on - strand, within AO353_26235 at 5768.165 kb on + strand, within AO353_26235 at 5768.165 kb on + strand, within AO353_26235 at 5768.166 kb on - strand, within AO353_26235 at 5768.294 kb on + strand, within AO353_26235 at 5768.318 kb on + strand, within AO353_26235 at 5768.318 kb on + strand, within AO353_26235 at 5768.319 kb on - strand, within AO353_26235 at 5768.358 kb on - strand, within AO353_26235 at 5768.412 kb on + strand, within AO353_26235 at 5768.413 kb on - strand, within AO353_26235 at 5768.454 kb on + strand, within AO353_26235
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.0625 vol% remove 5,766,130 + AO353_26215 0.15 -1.5 5,766,169 + AO353_26215 0.21 +0.5 5,766,169 + AO353_26215 0.21 -0.9 5,766,170 - AO353_26215 0.21 -0.2 5,766,170 - AO353_26215 0.21 -0.4 5,766,272 + AO353_26215 0.37 +1.1 5,766,316 + AO353_26215 0.43 -0.5 5,766,388 + AO353_26215 0.54 +0.7 5,766,388 + AO353_26215 0.54 +0.1 5,766,389 - AO353_26215 0.54 -1.3 5,766,389 - AO353_26215 0.54 +0.2 5,766,389 - AO353_26215 0.54 -1.0 5,766,452 + AO353_26215 0.64 +0.5 5,766,453 - AO353_26215 0.64 -1.7 5,766,478 + AO353_26215 0.68 +0.6 5,766,478 + AO353_26215 0.68 -0.1 5,766,479 - AO353_26215 0.68 -0.5 5,766,563 + AO353_26215 0.81 -1.3 5,766,564 - AO353_26215 0.81 +2.5 5,766,676 + -0.2 5,766,677 - +0.5 5,766,698 + +0.0 5,766,698 + +0.6 5,766,698 + +0.3 5,766,698 + -0.5 5,766,698 + -0.7 5,766,699 - +1.3 5,766,740 + -1.1 5,766,740 + AO353_26220 0.15 -2.2 5,766,740 + AO353_26220 0.15 -2.5 5,766,741 - AO353_26220 0.16 +1.0 5,766,946 + AO353_26220 0.71 -0.2 5,766,946 + AO353_26220 0.71 +2.8 5,766,957 + AO353_26220 0.74 +0.5 5,766,958 - AO353_26220 0.74 +1.1 5,766,958 - AO353_26220 0.74 +0.8 5,767,041 + +1.2 5,767,041 + +0.7 5,767,042 - +0.2 5,767,073 - +0.4 5,767,105 - +0.3 5,767,108 + -0.8 5,767,108 + +1.1 5,767,109 - +0.4 5,767,245 + AO353_26225 0.35 +0.1 5,767,245 + AO353_26225 0.35 +0.7 5,767,245 + AO353_26225 0.35 +0.8 5,767,245 + AO353_26225 0.35 -0.5 5,767,246 - AO353_26225 0.35 +1.4 5,767,319 - AO353_26225 0.49 +0.1 5,767,319 - AO353_26225 0.49 +1.2 5,767,319 - AO353_26225 0.49 +0.1 5,767,319 - AO353_26225 0.49 +0.2 5,767,319 - AO353_26225 0.49 +2.3 5,767,319 - AO353_26225 0.49 +0.5 5,767,475 + AO353_26225 0.80 -0.8 5,767,498 + AO353_26225 0.85 +1.2 5,767,498 + AO353_26225 0.85 -0.5 5,767,499 - AO353_26225 0.85 +0.5 5,767,499 - AO353_26225 0.85 -0.7 5,767,499 - AO353_26225 0.85 +1.5 5,767,525 + +2.1 5,767,525 + +0.5 5,767,525 + -1.4 5,767,525 + -0.0 5,767,526 - +0.5 5,767,526 - -1.1 5,767,579 + +0.5 5,767,579 + +0.1 5,767,580 - +0.1 5,767,580 - +1.9 5,767,630 + AO353_26230 0.16 +1.1 5,767,630 + AO353_26230 0.16 -2.0 5,767,631 - AO353_26230 0.17 +2.3 5,767,631 - AO353_26230 0.17 -0.8 5,767,631 - AO353_26230 0.17 -0.0 5,767,756 + AO353_26230 0.56 -0.8 5,767,756 + AO353_26230 0.56 +0.8 5,767,756 + AO353_26230 0.56 -0.0 5,767,756 + AO353_26230 0.56 +0.0 5,767,756 + AO353_26230 0.56 +1.5 5,767,757 - AO353_26230 0.56 +0.3 5,767,827 + AO353_26230 0.78 -1.1 5,767,828 - AO353_26230 0.79 +0.3 5,767,828 - AO353_26230 0.79 +2.5 5,767,839 - AO353_26230 0.82 +0.1 5,767,839 - AO353_26230 0.82 +0.1 5,767,882 + -1.8 5,767,882 + +2.1 5,767,882 + +2.1 5,767,882 + -1.2 5,767,883 - +0.1 5,767,953 + -0.5 5,767,953 + -0.1 5,767,954 - +0.1 5,767,972 + -0.9 5,767,973 - +0.5 5,767,973 - +0.8 5,767,973 - +1.2 5,768,098 + AO353_26235 0.16 +0.1 5,768,098 + AO353_26235 0.16 +1.5 5,768,099 - AO353_26235 0.16 -2.1 5,768,165 + AO353_26235 0.23 +1.0 5,768,165 + AO353_26235 0.23 -2.3 5,768,166 - AO353_26235 0.23 -0.8 5,768,294 + AO353_26235 0.36 +0.5 5,768,318 + AO353_26235 0.39 +0.9 5,768,318 + AO353_26235 0.39 -0.2 5,768,319 - AO353_26235 0.39 -0.2 5,768,358 - AO353_26235 0.43 -0.2 5,768,412 + AO353_26235 0.49 -0.5 5,768,413 - AO353_26235 0.49 -0.2 5,768,454 + AO353_26235 0.53 +1.8
Or see this region's nucleotide sequence