Experiment: Furfuryl Alcohol 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09615 and AO353_09620 overlap by 8 nucleotides AO353_09620 and AO353_09625 are separated by 108 nucleotides
AO353_09615: AO353_09615 - type VI secretion protein, at 2,108,776 to 2,109,828
_09615
AO353_09620: AO353_09620 - ClpV1 family T6SS ATPase, at 2,109,821 to 2,112,499
_09620
AO353_09625: AO353_09625 - type VI secretion protein ImpA, at 2,112,608 to 2,114,548
_09625
Position (kb)
2109
2110
2111
2112
2113 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2108.848 kb on + strand at 2108.848 kb on + strand at 2108.848 kb on + strand at 2108.848 kb on + strand at 2108.849 kb on - strand at 2108.849 kb on - strand at 2108.849 kb on - strand at 2108.994 kb on - strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.088 kb on + strand, within AO353_09615 at 2109.089 kb on - strand, within AO353_09615 at 2109.089 kb on - strand, within AO353_09615 at 2109.089 kb on - strand, within AO353_09615 at 2109.089 kb on - strand, within AO353_09615 at 2109.089 kb on - strand, within AO353_09615 at 2109.089 kb on - strand, within AO353_09615 at 2109.089 kb on - strand, within AO353_09615 at 2109.089 kb on - strand, within AO353_09615 at 2109.175 kb on + strand, within AO353_09615 at 2109.175 kb on + strand, within AO353_09615 at 2109.232 kb on + strand, within AO353_09615 at 2109.323 kb on - strand, within AO353_09615 at 2109.353 kb on - strand, within AO353_09615 at 2109.376 kb on - strand, within AO353_09615 at 2109.376 kb on - strand, within AO353_09615 at 2109.385 kb on + strand, within AO353_09615 at 2109.385 kb on + strand, within AO353_09615 at 2109.386 kb on - strand, within AO353_09615 at 2109.386 kb on - strand, within AO353_09615 at 2109.415 kb on + strand, within AO353_09615 at 2109.415 kb on + strand, within AO353_09615 at 2109.415 kb on + strand, within AO353_09615 at 2109.415 kb on + strand, within AO353_09615 at 2109.415 kb on + strand, within AO353_09615 at 2109.415 kb on + strand, within AO353_09615 at 2109.416 kb on - strand, within AO353_09615 at 2109.416 kb on - strand, within AO353_09615 at 2109.503 kb on - strand, within AO353_09615 at 2109.503 kb on - strand, within AO353_09615 at 2109.503 kb on - strand, within AO353_09615 at 2109.562 kb on + strand, within AO353_09615 at 2109.562 kb on + strand, within AO353_09615 at 2109.562 kb on + strand, within AO353_09615 at 2109.562 kb on + strand, within AO353_09615 at 2109.562 kb on + strand, within AO353_09615 at 2109.562 kb on + strand, within AO353_09615 at 2109.562 kb on + strand, within AO353_09615 at 2109.562 kb on + strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.563 kb on - strand, within AO353_09615 at 2109.623 kb on - strand, within AO353_09615 at 2109.623 kb on - strand, within AO353_09615 at 2109.677 kb on + strand, within AO353_09615 at 2109.720 kb on + strand, within AO353_09615 at 2109.720 kb on + strand, within AO353_09615 at 2109.720 kb on + strand, within AO353_09615 at 2109.720 kb on + strand, within AO353_09615 at 2109.721 kb on - strand, within AO353_09615 at 2109.758 kb on + strand at 2109.758 kb on + strand at 2109.758 kb on + strand at 2109.758 kb on + strand at 2109.759 kb on - strand at 2109.759 kb on - strand at 2109.759 kb on - strand at 2109.759 kb on - strand at 2109.761 kb on + strand at 2109.762 kb on - strand at 2109.775 kb on + strand at 2109.776 kb on - strand at 2109.858 kb on + strand at 2109.859 kb on - strand at 2109.859 kb on - strand at 2109.872 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.923 kb on + strand at 2109.924 kb on - strand at 2109.924 kb on - strand at 2109.924 kb on - strand at 2109.924 kb on - strand at 2109.924 kb on - strand at 2109.924 kb on - strand at 2110.125 kb on - strand, within AO353_09620 at 2110.125 kb on - strand, within AO353_09620 at 2110.277 kb on + strand, within AO353_09620 at 2110.277 kb on + strand, within AO353_09620 at 2110.277 kb on + strand, within AO353_09620 at 2110.277 kb on + strand, within AO353_09620 at 2110.277 kb on + strand, within AO353_09620 at 2110.277 kb on + strand, within AO353_09620 at 2110.277 kb on + strand, within AO353_09620 at 2110.278 kb on - strand, within AO353_09620 at 2110.278 kb on - strand, within AO353_09620 at 2110.278 kb on - strand, within AO353_09620 at 2110.278 kb on - strand, within AO353_09620 at 2110.278 kb on - strand, within AO353_09620 at 2110.278 kb on - strand, within AO353_09620 at 2110.278 kb on - strand, within AO353_09620 at 2110.278 kb on - strand, within AO353_09620 at 2110.406 kb on - strand, within AO353_09620 at 2110.547 kb on - strand, within AO353_09620 at 2110.742 kb on - strand, within AO353_09620 at 2110.764 kb on + strand, within AO353_09620 at 2110.765 kb on - strand, within AO353_09620 at 2110.765 kb on - strand, within AO353_09620 at 2110.765 kb on - strand, within AO353_09620 at 2110.765 kb on - strand, within AO353_09620 at 2110.868 kb on + strand, within AO353_09620 at 2110.868 kb on + strand, within AO353_09620 at 2110.869 kb on - strand, within AO353_09620 at 2110.869 kb on - strand, within AO353_09620 at 2111.051 kb on + strand, within AO353_09620 at 2111.052 kb on - strand, within AO353_09620 at 2111.325 kb on + strand, within AO353_09620 at 2111.325 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.602 kb on + strand, within AO353_09620 at 2111.603 kb on - strand, within AO353_09620 at 2111.603 kb on - strand, within AO353_09620 at 2111.603 kb on - strand, within AO353_09620 at 2111.603 kb on - strand, within AO353_09620 at 2111.603 kb on - strand, within AO353_09620 at 2111.603 kb on - strand, within AO353_09620 at 2111.762 kb on + strand, within AO353_09620 at 2111.762 kb on + strand, within AO353_09620 at 2111.763 kb on - strand, within AO353_09620 at 2111.763 kb on - strand, within AO353_09620 at 2111.763 kb on - strand, within AO353_09620 at 2111.763 kb on - strand, within AO353_09620 at 2111.763 kb on - strand, within AO353_09620 at 2111.852 kb on + strand, within AO353_09620 at 2111.877 kb on + strand, within AO353_09620 at 2111.877 kb on + strand, within AO353_09620 at 2111.878 kb on - strand, within AO353_09620 at 2111.906 kb on + strand, within AO353_09620 at 2111.907 kb on - strand, within AO353_09620 at 2112.191 kb on + strand, within AO353_09620 at 2112.192 kb on - strand, within AO353_09620 at 2112.194 kb on + strand, within AO353_09620 at 2112.291 kb on - strand at 2112.384 kb on + strand at 2112.477 kb on - strand at 2112.497 kb on + strand at 2112.497 kb on + strand at 2112.498 kb on - strand at 2112.587 kb on - strand at 2112.587 kb on - strand at 2112.587 kb on - strand at 2112.587 kb on - strand at 2112.603 kb on + strand at 2112.603 kb on + strand at 2112.612 kb on + strand at 2112.612 kb on + strand at 2112.612 kb on + strand at 2112.612 kb on + strand at 2112.612 kb on + strand at 2112.612 kb on + strand at 2112.612 kb on + strand at 2112.613 kb on - strand at 2112.613 kb on - strand at 2112.613 kb on - strand at 2112.613 kb on - strand at 2112.613 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.0625 vol% remove 2,108,848 + +0.5 2,108,848 + -0.4 2,108,848 + +1.7 2,108,848 + -0.0 2,108,849 - -0.9 2,108,849 - +0.7 2,108,849 - -0.9 2,108,994 - AO353_09615 0.21 -0.9 2,109,088 + AO353_09615 0.30 -0.1 2,109,088 + AO353_09615 0.30 +0.3 2,109,088 + AO353_09615 0.30 +0.3 2,109,088 + AO353_09615 0.30 -0.3 2,109,088 + AO353_09615 0.30 +0.2 2,109,088 + AO353_09615 0.30 +2.3 2,109,088 + AO353_09615 0.30 -1.7 2,109,088 + AO353_09615 0.30 +0.2 2,109,088 + AO353_09615 0.30 -0.3 2,109,088 + AO353_09615 0.30 -1.0 2,109,088 + AO353_09615 0.30 +0.1 2,109,089 - AO353_09615 0.30 -1.6 2,109,089 - AO353_09615 0.30 +0.6 2,109,089 - AO353_09615 0.30 +1.3 2,109,089 - AO353_09615 0.30 +1.5 2,109,089 - AO353_09615 0.30 +1.9 2,109,089 - AO353_09615 0.30 +0.6 2,109,089 - AO353_09615 0.30 +0.3 2,109,089 - AO353_09615 0.30 +1.1 2,109,175 + AO353_09615 0.38 -1.3 2,109,175 + AO353_09615 0.38 -0.4 2,109,232 + AO353_09615 0.43 +0.0 2,109,323 - AO353_09615 0.52 -1.3 2,109,353 - AO353_09615 0.55 -0.7 2,109,376 - AO353_09615 0.57 +0.3 2,109,376 - AO353_09615 0.57 -0.3 2,109,385 + AO353_09615 0.58 +1.9 2,109,385 + AO353_09615 0.58 +1.7 2,109,386 - AO353_09615 0.58 -1.4 2,109,386 - AO353_09615 0.58 +1.2 2,109,415 + AO353_09615 0.61 -0.2 2,109,415 + AO353_09615 0.61 +0.6 2,109,415 + AO353_09615 0.61 +1.9 2,109,415 + AO353_09615 0.61 -2.0 2,109,415 + AO353_09615 0.61 +0.4 2,109,415 + AO353_09615 0.61 -0.1 2,109,416 - AO353_09615 0.61 +3.6 2,109,416 - AO353_09615 0.61 -1.7 2,109,503 - AO353_09615 0.69 -0.6 2,109,503 - AO353_09615 0.69 -0.0 2,109,503 - AO353_09615 0.69 -1.2 2,109,562 + AO353_09615 0.75 +0.7 2,109,562 + AO353_09615 0.75 -0.2 2,109,562 + AO353_09615 0.75 +1.9 2,109,562 + AO353_09615 0.75 -0.3 2,109,562 + AO353_09615 0.75 +1.0 2,109,562 + AO353_09615 0.75 -0.2 2,109,562 + AO353_09615 0.75 +2.3 2,109,562 + AO353_09615 0.75 +1.9 2,109,563 - AO353_09615 0.75 -0.9 2,109,563 - AO353_09615 0.75 -0.6 2,109,563 - AO353_09615 0.75 +0.7 2,109,563 - AO353_09615 0.75 +0.3 2,109,563 - AO353_09615 0.75 +0.7 2,109,563 - AO353_09615 0.75 -0.4 2,109,563 - AO353_09615 0.75 +1.0 2,109,563 - AO353_09615 0.75 -0.9 2,109,563 - AO353_09615 0.75 +0.5 2,109,563 - AO353_09615 0.75 -1.0 2,109,563 - AO353_09615 0.75 +0.2 2,109,563 - AO353_09615 0.75 +1.3 2,109,563 - AO353_09615 0.75 +2.9 2,109,623 - AO353_09615 0.80 +1.0 2,109,623 - AO353_09615 0.80 -0.7 2,109,677 + AO353_09615 0.86 +0.5 2,109,720 + AO353_09615 0.90 +1.3 2,109,720 + AO353_09615 0.90 +2.9 2,109,720 + AO353_09615 0.90 -0.3 2,109,720 + AO353_09615 0.90 -1.9 2,109,721 - AO353_09615 0.90 +0.5 2,109,758 + -1.0 2,109,758 + -1.0 2,109,758 + +1.0 2,109,758 + +0.8 2,109,759 - +0.7 2,109,759 - +1.1 2,109,759 - +0.9 2,109,759 - -1.3 2,109,761 + +1.9 2,109,762 - +0.3 2,109,775 + -2.2 2,109,776 - -1.0 2,109,858 + -0.5 2,109,859 - -2.0 2,109,859 - +0.6 2,109,872 + -0.4 2,109,923 + +0.7 2,109,923 + -0.6 2,109,923 + +0.8 2,109,923 + +0.9 2,109,923 + +0.7 2,109,923 + +0.3 2,109,923 + +2.0 2,109,923 + +0.0 2,109,923 + +1.2 2,109,923 + +1.3 2,109,923 + +0.3 2,109,924 - +0.5 2,109,924 - +0.6 2,109,924 - -0.3 2,109,924 - -1.3 2,109,924 - -0.3 2,109,924 - +1.0 2,110,125 - AO353_09620 0.11 +0.3 2,110,125 - AO353_09620 0.11 -0.6 2,110,277 + AO353_09620 0.17 -0.8 2,110,277 + AO353_09620 0.17 -0.9 2,110,277 + AO353_09620 0.17 +1.1 2,110,277 + AO353_09620 0.17 +0.9 2,110,277 + AO353_09620 0.17 -0.6 2,110,277 + AO353_09620 0.17 -0.1 2,110,277 + AO353_09620 0.17 -0.7 2,110,278 - AO353_09620 0.17 -1.0 2,110,278 - AO353_09620 0.17 -1.4 2,110,278 - AO353_09620 0.17 -0.3 2,110,278 - AO353_09620 0.17 -0.3 2,110,278 - AO353_09620 0.17 -0.2 2,110,278 - AO353_09620 0.17 +2.3 2,110,278 - AO353_09620 0.17 -0.3 2,110,278 - AO353_09620 0.17 -0.1 2,110,406 - AO353_09620 0.22 -1.5 2,110,547 - AO353_09620 0.27 -1.8 2,110,742 - AO353_09620 0.34 +1.7 2,110,764 + AO353_09620 0.35 +1.1 2,110,765 - AO353_09620 0.35 -0.1 2,110,765 - AO353_09620 0.35 -1.0 2,110,765 - AO353_09620 0.35 -0.7 2,110,765 - AO353_09620 0.35 -1.5 2,110,868 + AO353_09620 0.39 +1.2 2,110,868 + AO353_09620 0.39 -1.3 2,110,869 - AO353_09620 0.39 -0.4 2,110,869 - AO353_09620 0.39 +0.2 2,111,051 + AO353_09620 0.46 -1.3 2,111,052 - AO353_09620 0.46 -0.6 2,111,325 + AO353_09620 0.56 -0.6 2,111,325 + AO353_09620 0.56 +0.2 2,111,602 + AO353_09620 0.66 -1.1 2,111,602 + AO353_09620 0.66 +0.3 2,111,602 + AO353_09620 0.66 -0.2 2,111,602 + AO353_09620 0.66 +0.3 2,111,602 + AO353_09620 0.66 -0.3 2,111,602 + AO353_09620 0.66 +1.1 2,111,602 + AO353_09620 0.66 -1.9 2,111,602 + AO353_09620 0.66 +0.0 2,111,602 + AO353_09620 0.66 +0.1 2,111,602 + AO353_09620 0.66 +0.2 2,111,602 + AO353_09620 0.66 +2.9 2,111,603 - AO353_09620 0.67 +0.3 2,111,603 - AO353_09620 0.67 -0.7 2,111,603 - AO353_09620 0.67 -0.0 2,111,603 - AO353_09620 0.67 +0.5 2,111,603 - AO353_09620 0.67 -0.7 2,111,603 - AO353_09620 0.67 -1.3 2,111,762 + AO353_09620 0.72 -1.5 2,111,762 + AO353_09620 0.72 +1.3 2,111,763 - AO353_09620 0.72 -0.3 2,111,763 - AO353_09620 0.72 -0.0 2,111,763 - AO353_09620 0.72 -1.8 2,111,763 - AO353_09620 0.72 +1.1 2,111,763 - AO353_09620 0.72 +1.2 2,111,852 + AO353_09620 0.76 +0.3 2,111,877 + AO353_09620 0.77 +0.6 2,111,877 + AO353_09620 0.77 -1.3 2,111,878 - AO353_09620 0.77 +0.5 2,111,906 + AO353_09620 0.78 -0.5 2,111,907 - AO353_09620 0.78 +0.1 2,112,191 + AO353_09620 0.88 +0.5 2,112,192 - AO353_09620 0.89 -1.0 2,112,194 + AO353_09620 0.89 -0.7 2,112,291 - -0.9 2,112,384 + -0.5 2,112,477 - +0.3 2,112,497 + -0.1 2,112,497 + +0.3 2,112,498 - -2.3 2,112,587 - +1.1 2,112,587 - -2.2 2,112,587 - -1.7 2,112,587 - +0.9 2,112,603 + +0.3 2,112,603 + -0.0 2,112,612 + -1.3 2,112,612 + -0.9 2,112,612 + -1.9 2,112,612 + -1.0 2,112,612 + +0.3 2,112,612 + +0.6 2,112,612 + +0.3 2,112,613 - -1.3 2,112,613 - +0.4 2,112,613 - +1.0 2,112,613 - +0.5 2,112,613 - +0.6
Or see this region's nucleotide sequence