Experiment: Furfuryl Alcohol 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06550 and AO353_06555 are separated by 205 nucleotides AO353_06555 and AO353_06560 are separated by 319 nucleotides
AO353_06550: AO353_06550 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase, at 1,455,906 to 1,457,255
_06550
AO353_06555: AO353_06555 - Fis family transcriptional regulator, at 1,457,461 to 1,459,377
_06555
AO353_06560: AO353_06560 - aldehyde dehydrogenase, at 1,459,697 to 1,461,217
_06560
Position (kb)
1457
1458
1459
1460 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1456.730 kb on - strand, within AO353_06550 at 1456.772 kb on - strand, within AO353_06550 at 1456.772 kb on - strand, within AO353_06550 at 1456.772 kb on - strand, within AO353_06550 at 1456.994 kb on - strand, within AO353_06550 at 1456.994 kb on - strand, within AO353_06550 at 1456.994 kb on - strand, within AO353_06550 at 1456.994 kb on - strand, within AO353_06550 at 1456.994 kb on - strand, within AO353_06550 at 1457.013 kb on + strand, within AO353_06550 at 1457.014 kb on - strand, within AO353_06550 at 1457.014 kb on - strand, within AO353_06550 at 1457.014 kb on - strand, within AO353_06550 at 1457.014 kb on - strand, within AO353_06550 at 1457.014 kb on - strand, within AO353_06550 at 1457.014 kb on - strand, within AO353_06550 at 1457.014 kb on - strand, within AO353_06550 at 1457.014 kb on - strand, within AO353_06550 at 1457.014 kb on - strand, within AO353_06550 at 1457.018 kb on - strand, within AO353_06550 at 1457.018 kb on - strand, within AO353_06550 at 1457.018 kb on - strand, within AO353_06550 at 1457.018 kb on - strand, within AO353_06550 at 1457.099 kb on - strand, within AO353_06550 at 1457.099 kb on - strand, within AO353_06550 at 1457.099 kb on - strand, within AO353_06550 at 1457.099 kb on - strand, within AO353_06550 at 1457.099 kb on - strand, within AO353_06550 at 1457.235 kb on - strand at 1457.235 kb on - strand at 1457.244 kb on - strand at 1457.244 kb on - strand at 1457.244 kb on - strand at 1457.244 kb on - strand at 1457.256 kb on - strand at 1457.256 kb on - strand at 1457.256 kb on - strand at 1457.256 kb on - strand at 1457.256 kb on - strand at 1457.267 kb on + strand at 1457.268 kb on - strand at 1457.268 kb on - strand at 1457.291 kb on - strand at 1457.291 kb on - strand at 1457.291 kb on - strand at 1457.314 kb on + strand at 1457.314 kb on + strand at 1457.369 kb on - strand at 1457.369 kb on - strand at 1457.470 kb on + strand at 1457.493 kb on + strand at 1457.493 kb on + strand at 1457.493 kb on + strand at 1457.494 kb on - strand at 1457.494 kb on - strand at 1457.494 kb on - strand at 1457.494 kb on - strand at 1457.494 kb on - strand at 1457.494 kb on - strand at 1457.494 kb on - strand at 1457.495 kb on + strand at 1457.495 kb on + strand at 1457.496 kb on - strand at 1457.533 kb on - strand at 1457.603 kb on + strand at 1457.658 kb on + strand, within AO353_06555 at 1457.759 kb on + strand, within AO353_06555 at 1457.760 kb on - strand, within AO353_06555 at 1457.760 kb on - strand, within AO353_06555 at 1457.760 kb on - strand, within AO353_06555 at 1457.906 kb on + strand, within AO353_06555 at 1457.906 kb on + strand, within AO353_06555 at 1457.906 kb on + strand, within AO353_06555 at 1457.907 kb on - strand, within AO353_06555 at 1457.907 kb on - strand, within AO353_06555 at 1457.907 kb on - strand, within AO353_06555 at 1457.907 kb on - strand, within AO353_06555 at 1457.907 kb on - strand, within AO353_06555 at 1457.907 kb on - strand, within AO353_06555 at 1457.907 kb on - strand, within AO353_06555 at 1458.037 kb on + strand, within AO353_06555 at 1458.037 kb on + strand, within AO353_06555 at 1458.037 kb on + strand, within AO353_06555 at 1458.037 kb on + strand, within AO353_06555 at 1458.037 kb on + strand, within AO353_06555 at 1458.037 kb on + strand, within AO353_06555 at 1458.037 kb on + strand, within AO353_06555 at 1458.038 kb on - strand, within AO353_06555 at 1458.038 kb on - strand, within AO353_06555 at 1458.040 kb on + strand, within AO353_06555 at 1458.040 kb on + strand, within AO353_06555 at 1458.041 kb on - strand, within AO353_06555 at 1458.041 kb on - strand, within AO353_06555 at 1458.041 kb on - strand, within AO353_06555 at 1458.041 kb on - strand, within AO353_06555 at 1458.041 kb on - strand, within AO353_06555 at 1458.279 kb on + strand, within AO353_06555 at 1458.280 kb on - strand, within AO353_06555 at 1458.280 kb on - strand, within AO353_06555 at 1458.280 kb on - strand, within AO353_06555 at 1458.381 kb on + strand, within AO353_06555 at 1458.381 kb on + strand, within AO353_06555 at 1458.381 kb on + strand, within AO353_06555 at 1458.381 kb on + strand, within AO353_06555 at 1458.381 kb on + strand, within AO353_06555 at 1458.387 kb on + strand, within AO353_06555 at 1458.436 kb on + strand, within AO353_06555 at 1458.437 kb on - strand, within AO353_06555 at 1458.437 kb on - strand, within AO353_06555 at 1458.437 kb on - strand, within AO353_06555 at 1458.597 kb on + strand, within AO353_06555 at 1458.597 kb on + strand, within AO353_06555 at 1458.637 kb on + strand, within AO353_06555 at 1458.637 kb on + strand, within AO353_06555 at 1458.638 kb on - strand, within AO353_06555 at 1458.638 kb on - strand, within AO353_06555 at 1458.734 kb on + strand, within AO353_06555 at 1458.734 kb on + strand, within AO353_06555 at 1458.735 kb on - strand, within AO353_06555 at 1458.735 kb on - strand, within AO353_06555 at 1458.735 kb on - strand, within AO353_06555 at 1458.746 kb on + strand, within AO353_06555 at 1458.746 kb on + strand, within AO353_06555 at 1458.746 kb on + strand, within AO353_06555 at 1458.746 kb on + strand, within AO353_06555 at 1458.746 kb on + strand, within AO353_06555 at 1458.746 kb on + strand, within AO353_06555 at 1458.746 kb on + strand, within AO353_06555 at 1458.746 kb on + strand, within AO353_06555 at 1458.746 kb on + strand, within AO353_06555 at 1458.747 kb on - strand, within AO353_06555 at 1458.747 kb on - strand, within AO353_06555 at 1458.903 kb on + strand, within AO353_06555 at 1458.903 kb on + strand, within AO353_06555 at 1458.903 kb on + strand, within AO353_06555 at 1458.903 kb on + strand, within AO353_06555 at 1458.903 kb on + strand, within AO353_06555 at 1458.903 kb on + strand, within AO353_06555 at 1458.903 kb on + strand, within AO353_06555 at 1458.903 kb on + strand, within AO353_06555 at 1458.904 kb on - strand, within AO353_06555 at 1458.904 kb on - strand, within AO353_06555 at 1458.904 kb on - strand, within AO353_06555 at 1458.982 kb on - strand, within AO353_06555 at 1458.982 kb on - strand, within AO353_06555 at 1458.982 kb on - strand, within AO353_06555 at 1459.250 kb on + strand at 1459.251 kb on - strand at 1459.251 kb on - strand at 1459.251 kb on - strand at 1459.251 kb on - strand at 1459.383 kb on - strand at 1459.385 kb on + strand at 1459.386 kb on - strand at 1459.386 kb on - strand at 1459.386 kb on - strand at 1459.386 kb on - strand at 1459.515 kb on - strand at 1459.515 kb on - strand at 1459.536 kb on - strand at 1459.558 kb on + strand at 1459.558 kb on + strand at 1459.583 kb on + strand at 1459.596 kb on + strand at 1459.596 kb on + strand at 1459.597 kb on - strand at 1459.632 kb on + strand at 1459.632 kb on + strand at 1459.633 kb on - strand at 1459.650 kb on - strand at 1459.666 kb on + strand at 1459.666 kb on + strand at 1459.666 kb on + strand at 1459.666 kb on + strand at 1459.666 kb on + strand at 1459.667 kb on - strand at 1459.667 kb on - strand at 1459.667 kb on - strand at 1459.667 kb on - strand at 1459.667 kb on - strand at 1459.667 kb on - strand at 1459.668 kb on + strand at 1459.668 kb on + strand at 1459.668 kb on + strand at 1459.668 kb on + strand at 1459.668 kb on + strand at 1459.668 kb on + strand at 1459.668 kb on + strand at 1459.669 kb on - strand at 1459.669 kb on - strand at 1459.669 kb on - strand at 1459.669 kb on - strand at 1459.669 kb on - strand at 1459.669 kb on - strand at 1459.669 kb on - strand at 1459.669 kb on - strand at 1459.669 kb on - strand at 1459.669 kb on - strand at 1459.689 kb on + strand at 1459.689 kb on + strand at 1459.689 kb on + strand at 1459.690 kb on - strand at 1459.690 kb on - strand at 1459.690 kb on - strand at 1459.690 kb on - strand at 1459.690 kb on - strand at 1459.704 kb on - strand at 1459.717 kb on + strand at 1459.717 kb on + strand at 1459.717 kb on + strand at 1459.717 kb on + strand at 1459.718 kb on - strand at 1459.718 kb on - strand at 1459.747 kb on + strand at 1459.747 kb on + strand at 1459.747 kb on + strand at 1459.748 kb on - strand at 1459.748 kb on - strand at 1459.748 kb on - strand at 1459.748 kb on - strand at 1459.748 kb on - strand at 1459.748 kb on - strand at 1459.748 kb on - strand at 1459.748 kb on - strand at 1459.751 kb on + strand at 1459.751 kb on + strand at 1459.751 kb on + strand at 1459.751 kb on + strand at 1459.752 kb on - strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.760 kb on + strand at 1459.761 kb on - strand at 1459.761 kb on - strand at 1459.761 kb on - strand at 1459.761 kb on - strand at 1459.761 kb on - strand at 1459.761 kb on - strand at 1459.761 kb on - strand at 1459.761 kb on - strand at 1459.761 kb on - strand at 1459.799 kb on + strand at 1459.799 kb on + strand at 1459.799 kb on + strand at 1459.799 kb on + strand at 1459.799 kb on + strand at 1459.800 kb on - strand at 1459.800 kb on - strand at 1459.800 kb on - strand at 1459.800 kb on - strand at 1459.810 kb on + strand at 1459.810 kb on + strand at 1459.810 kb on + strand at 1459.810 kb on + strand at 1459.810 kb on + strand at 1459.810 kb on + strand at 1459.811 kb on - strand at 1459.811 kb on - strand at 1459.811 kb on - strand at 1459.811 kb on - strand at 1459.811 kb on - strand at 1459.811 kb on - strand at 1459.811 kb on - strand at 1459.811 kb on - strand at 1459.947 kb on + strand, within AO353_06560 at 1460.076 kb on - strand, within AO353_06560 at 1460.141 kb on + strand, within AO353_06560 at 1460.141 kb on + strand, within AO353_06560 at 1460.141 kb on + strand, within AO353_06560 at 1460.141 kb on + strand, within AO353_06560 at 1460.142 kb on - strand, within AO353_06560 at 1460.142 kb on - strand, within AO353_06560 at 1460.142 kb on - strand, within AO353_06560
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.0625 vol% remove 1,456,730 - AO353_06550 0.61 +2.1 1,456,772 - AO353_06550 0.64 -1.4 1,456,772 - AO353_06550 0.64 -0.5 1,456,772 - AO353_06550 0.64 -0.2 1,456,994 - AO353_06550 0.81 -1.2 1,456,994 - AO353_06550 0.81 -1.1 1,456,994 - AO353_06550 0.81 +0.4 1,456,994 - AO353_06550 0.81 -1.2 1,456,994 - AO353_06550 0.81 -0.5 1,457,013 + AO353_06550 0.82 -1.7 1,457,014 - AO353_06550 0.82 +0.1 1,457,014 - AO353_06550 0.82 +0.2 1,457,014 - AO353_06550 0.82 -1.0 1,457,014 - AO353_06550 0.82 +0.3 1,457,014 - AO353_06550 0.82 -0.6 1,457,014 - AO353_06550 0.82 -1.7 1,457,014 - AO353_06550 0.82 +0.1 1,457,014 - AO353_06550 0.82 -0.1 1,457,014 - AO353_06550 0.82 -0.4 1,457,018 - AO353_06550 0.82 -0.0 1,457,018 - AO353_06550 0.82 -1.9 1,457,018 - AO353_06550 0.82 +0.1 1,457,018 - AO353_06550 0.82 -0.7 1,457,099 - AO353_06550 0.88 +1.3 1,457,099 - AO353_06550 0.88 -1.0 1,457,099 - AO353_06550 0.88 +1.1 1,457,099 - AO353_06550 0.88 +2.4 1,457,099 - AO353_06550 0.88 +1.1 1,457,235 - +0.2 1,457,235 - +1.1 1,457,244 - -0.1 1,457,244 - +0.9 1,457,244 - -0.2 1,457,244 - -1.0 1,457,256 - -3.1 1,457,256 - +0.5 1,457,256 - +0.1 1,457,256 - -1.4 1,457,256 - +0.0 1,457,267 + -2.6 1,457,268 - +0.0 1,457,268 - +0.1 1,457,291 - -1.0 1,457,291 - +0.6 1,457,291 - +0.1 1,457,314 + +0.5 1,457,314 + -1.2 1,457,369 - +0.1 1,457,369 - +1.3 1,457,470 + +1.1 1,457,493 + -2.4 1,457,493 + +2.7 1,457,493 + +0.8 1,457,494 - +0.7 1,457,494 - -1.2 1,457,494 - +1.5 1,457,494 - -0.5 1,457,494 - +0.4 1,457,494 - +0.7 1,457,494 - -0.0 1,457,495 + +0.1 1,457,495 + +0.9 1,457,496 - -1.5 1,457,533 - +0.9 1,457,603 + -0.6 1,457,658 + AO353_06555 0.10 +0.9 1,457,759 + AO353_06555 0.16 +1.6 1,457,760 - AO353_06555 0.16 +1.7 1,457,760 - AO353_06555 0.16 -0.8 1,457,760 - AO353_06555 0.16 -1.1 1,457,906 + AO353_06555 0.23 +0.3 1,457,906 + AO353_06555 0.23 +1.1 1,457,906 + AO353_06555 0.23 +0.5 1,457,907 - AO353_06555 0.23 -1.5 1,457,907 - AO353_06555 0.23 -0.8 1,457,907 - AO353_06555 0.23 +0.6 1,457,907 - AO353_06555 0.23 +0.7 1,457,907 - AO353_06555 0.23 +1.1 1,457,907 - AO353_06555 0.23 -0.0 1,457,907 - AO353_06555 0.23 -0.3 1,458,037 + AO353_06555 0.30 +0.5 1,458,037 + AO353_06555 0.30 +0.5 1,458,037 + AO353_06555 0.30 -0.1 1,458,037 + AO353_06555 0.30 -0.2 1,458,037 + AO353_06555 0.30 -0.6 1,458,037 + AO353_06555 0.30 +0.7 1,458,037 + AO353_06555 0.30 +1.1 1,458,038 - AO353_06555 0.30 +0.2 1,458,038 - AO353_06555 0.30 -1.2 1,458,040 + AO353_06555 0.30 -0.1 1,458,040 + AO353_06555 0.30 -1.0 1,458,041 - AO353_06555 0.30 -0.2 1,458,041 - AO353_06555 0.30 -0.5 1,458,041 - AO353_06555 0.30 -0.1 1,458,041 - AO353_06555 0.30 -0.7 1,458,041 - AO353_06555 0.30 +0.4 1,458,279 + AO353_06555 0.43 -0.1 1,458,280 - AO353_06555 0.43 +0.1 1,458,280 - AO353_06555 0.43 +0.9 1,458,280 - AO353_06555 0.43 -0.2 1,458,381 + AO353_06555 0.48 -0.8 1,458,381 + AO353_06555 0.48 -1.7 1,458,381 + AO353_06555 0.48 -1.2 1,458,381 + AO353_06555 0.48 +2.1 1,458,381 + AO353_06555 0.48 +0.4 1,458,387 + AO353_06555 0.48 +0.3 1,458,436 + AO353_06555 0.51 +0.8 1,458,437 - AO353_06555 0.51 +0.0 1,458,437 - AO353_06555 0.51 -0.1 1,458,437 - AO353_06555 0.51 -1.5 1,458,597 + AO353_06555 0.59 +1.1 1,458,597 + AO353_06555 0.59 -0.9 1,458,637 + AO353_06555 0.61 -0.4 1,458,637 + AO353_06555 0.61 +0.2 1,458,638 - AO353_06555 0.61 +0.7 1,458,638 - AO353_06555 0.61 +1.0 1,458,734 + AO353_06555 0.66 +0.4 1,458,734 + AO353_06555 0.66 +0.9 1,458,735 - AO353_06555 0.66 +0.2 1,458,735 - AO353_06555 0.66 -1.1 1,458,735 - AO353_06555 0.66 -1.5 1,458,746 + AO353_06555 0.67 +1.3 1,458,746 + AO353_06555 0.67 -1.7 1,458,746 + AO353_06555 0.67 -0.5 1,458,746 + AO353_06555 0.67 -0.2 1,458,746 + AO353_06555 0.67 -0.0 1,458,746 + AO353_06555 0.67 +0.7 1,458,746 + AO353_06555 0.67 +1.4 1,458,746 + AO353_06555 0.67 +0.6 1,458,746 + AO353_06555 0.67 -0.3 1,458,747 - AO353_06555 0.67 +1.1 1,458,747 - AO353_06555 0.67 -0.5 1,458,903 + AO353_06555 0.75 -0.0 1,458,903 + AO353_06555 0.75 -0.5 1,458,903 + AO353_06555 0.75 -0.2 1,458,903 + AO353_06555 0.75 +0.3 1,458,903 + AO353_06555 0.75 -0.9 1,458,903 + AO353_06555 0.75 -0.2 1,458,903 + AO353_06555 0.75 -0.5 1,458,903 + AO353_06555 0.75 +1.7 1,458,904 - AO353_06555 0.75 -1.0 1,458,904 - AO353_06555 0.75 +0.9 1,458,904 - AO353_06555 0.75 +0.2 1,458,982 - AO353_06555 0.79 +0.4 1,458,982 - AO353_06555 0.79 +0.8 1,458,982 - AO353_06555 0.79 +0.1 1,459,250 + -1.3 1,459,251 - -2.8 1,459,251 - +0.5 1,459,251 - +1.5 1,459,251 - +0.2 1,459,383 - -0.3 1,459,385 + +0.2 1,459,386 - +0.6 1,459,386 - +1.1 1,459,386 - -1.5 1,459,386 - -0.5 1,459,515 - +0.6 1,459,515 - -2.4 1,459,536 - -0.5 1,459,558 + -0.6 1,459,558 + -0.3 1,459,583 + -0.2 1,459,596 + +2.3 1,459,596 + -1.2 1,459,597 - -0.2 1,459,632 + +0.4 1,459,632 + -0.4 1,459,633 - +0.3 1,459,650 - +0.2 1,459,666 + +2.1 1,459,666 + -2.1 1,459,666 + -0.2 1,459,666 + -0.7 1,459,666 + -1.5 1,459,667 - -0.9 1,459,667 - -1.5 1,459,667 - +0.6 1,459,667 - +0.4 1,459,667 - -0.5 1,459,667 - +0.1 1,459,668 + +1.3 1,459,668 + +0.4 1,459,668 + +0.5 1,459,668 + -1.1 1,459,668 + +0.5 1,459,668 + +0.3 1,459,668 + +0.4 1,459,669 - -1.5 1,459,669 - +0.8 1,459,669 - -0.1 1,459,669 - +0.4 1,459,669 - +0.4 1,459,669 - -0.1 1,459,669 - +0.3 1,459,669 - +1.1 1,459,669 - +0.6 1,459,669 - +0.1 1,459,689 + -0.9 1,459,689 + -2.1 1,459,689 + +0.1 1,459,690 - +0.2 1,459,690 - +0.1 1,459,690 - +0.1 1,459,690 - -1.4 1,459,690 - +1.1 1,459,704 - +0.7 1,459,717 + +0.8 1,459,717 + -0.2 1,459,717 + -0.5 1,459,717 + -1.0 1,459,718 - +1.1 1,459,718 - -0.9 1,459,747 + +1.1 1,459,747 + -0.2 1,459,747 + +1.8 1,459,748 - +0.8 1,459,748 - -1.5 1,459,748 - -0.2 1,459,748 - -0.2 1,459,748 - -1.5 1,459,748 - +0.1 1,459,748 - +1.1 1,459,748 - +0.1 1,459,751 + +1.1 1,459,751 + +1.1 1,459,751 + -0.7 1,459,751 + +0.9 1,459,752 - -2.2 1,459,760 + +0.1 1,459,760 + +0.1 1,459,760 + +0.4 1,459,760 + -0.6 1,459,760 + +0.5 1,459,760 + -0.5 1,459,760 + -0.3 1,459,760 + -1.1 1,459,760 + -0.5 1,459,760 + +1.5 1,459,760 + +0.4 1,459,760 + +0.4 1,459,760 + -2.1 1,459,761 - -0.5 1,459,761 - -2.4 1,459,761 - +0.3 1,459,761 - -0.1 1,459,761 - -0.1 1,459,761 - -0.0 1,459,761 - +0.0 1,459,761 - +0.3 1,459,761 - +0.2 1,459,799 + -0.9 1,459,799 + -2.0 1,459,799 + -0.9 1,459,799 + +0.1 1,459,799 + -0.9 1,459,800 - +0.1 1,459,800 - -0.2 1,459,800 - -0.5 1,459,800 - -1.9 1,459,810 + -0.0 1,459,810 + -0.1 1,459,810 + -0.1 1,459,810 + +0.3 1,459,810 + +0.5 1,459,810 + -1.5 1,459,811 - -0.3 1,459,811 - -0.8 1,459,811 - +0.8 1,459,811 - -0.4 1,459,811 - +0.9 1,459,811 - -1.5 1,459,811 - -0.5 1,459,811 - -0.6 1,459,947 + AO353_06560 0.16 +0.2 1,460,076 - AO353_06560 0.25 -0.1 1,460,141 + AO353_06560 0.29 +0.2 1,460,141 + AO353_06560 0.29 -0.0 1,460,141 + AO353_06560 0.29 +1.5 1,460,141 + AO353_06560 0.29 +1.1 1,460,142 - AO353_06560 0.29 -0.3 1,460,142 - AO353_06560 0.29 +0.9 1,460,142 - AO353_06560 0.29 +0.8
Or see this region's nucleotide sequence