Experiment: Furfuryl Alcohol 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00515 and AO353_00520 are separated by 104 nucleotides AO353_00520 and AO353_00525 are separated by 179 nucleotides AO353_00525 and AO353_00530 are separated by 213 nucleotides
AO353_00515: AO353_00515 - hypothetical protein, at 105,791 to 106,228
_00515
AO353_00520: AO353_00520 - universal stress protein UspA, at 106,333 to 106,770
_00520
AO353_00525: AO353_00525 - ABC transporter ATP-binding protein, at 106,950 to 108,866
_00525
AO353_00530: AO353_00530 - lytic transglycosylase, at 109,080 to 111,008
_00530
Position (kb)
106
107
108
109 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 105.994 kb on - strand at 106.157 kb on - strand, within AO353_00515 at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.229 kb on - strand at 106.229 kb on - strand at 106.235 kb on - strand at 106.235 kb on - strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.297 kb on - strand at 106.297 kb on - strand at 106.297 kb on - strand at 106.297 kb on - strand at 106.300 kb on + strand at 106.300 kb on + strand at 106.300 kb on + strand at 106.347 kb on + strand at 106.347 kb on + strand at 106.347 kb on + strand at 106.347 kb on + strand at 106.347 kb on + strand at 106.348 kb on - strand at 106.348 kb on - strand at 106.348 kb on - strand at 106.348 kb on - strand at 106.348 kb on - strand at 106.361 kb on + strand at 106.361 kb on + strand at 106.368 kb on - strand at 106.368 kb on - strand at 106.368 kb on - strand at 106.446 kb on + strand, within AO353_00520 at 106.447 kb on - strand, within AO353_00520 at 106.447 kb on - strand, within AO353_00520 at 106.447 kb on - strand, within AO353_00520 at 106.447 kb on - strand, within AO353_00520 at 106.561 kb on + strand, within AO353_00520 at 106.561 kb on + strand, within AO353_00520 at 106.561 kb on + strand, within AO353_00520 at 106.582 kb on + strand, within AO353_00520 at 106.583 kb on - strand, within AO353_00520 at 106.598 kb on - strand, within AO353_00520 at 106.626 kb on + strand, within AO353_00520 at 106.626 kb on + strand, within AO353_00520 at 106.626 kb on + strand, within AO353_00520 at 106.626 kb on + strand, within AO353_00520 at 106.627 kb on - strand, within AO353_00520 at 106.627 kb on - strand, within AO353_00520 at 106.627 kb on - strand, within AO353_00520 at 106.772 kb on + strand at 106.772 kb on + strand at 106.772 kb on + strand at 106.772 kb on + strand at 106.772 kb on + strand at 106.772 kb on + strand at 106.773 kb on - strand at 106.773 kb on - strand at 106.773 kb on - strand at 106.795 kb on + strand at 106.795 kb on + strand at 106.795 kb on + strand at 106.795 kb on + strand at 106.795 kb on + strand at 106.796 kb on - strand at 106.796 kb on - strand at 106.796 kb on - strand at 106.796 kb on - strand at 106.826 kb on + strand at 106.827 kb on - strand at 106.827 kb on - strand at 106.880 kb on + strand at 106.880 kb on + strand at 106.880 kb on + strand at 106.881 kb on - strand at 106.916 kb on + strand at 106.916 kb on + strand at 106.917 kb on - strand at 106.983 kb on + strand at 106.984 kb on - strand at 106.984 kb on - strand at 107.053 kb on + strand at 107.053 kb on + strand at 107.053 kb on + strand at 107.054 kb on - strand at 107.054 kb on - strand at 107.054 kb on - strand at 107.054 kb on - strand at 107.152 kb on + strand, within AO353_00525 at 107.152 kb on + strand, within AO353_00525 at 107.152 kb on + strand, within AO353_00525 at 107.152 kb on + strand, within AO353_00525 at 107.152 kb on + strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.317 kb on + strand, within AO353_00525 at 107.317 kb on + strand, within AO353_00525 at 107.317 kb on + strand, within AO353_00525 at 107.484 kb on + strand, within AO353_00525 at 107.485 kb on - strand, within AO353_00525 at 107.613 kb on + strand, within AO353_00525 at 107.613 kb on + strand, within AO353_00525 at 107.613 kb on + strand, within AO353_00525 at 107.614 kb on - strand, within AO353_00525 at 107.614 kb on - strand, within AO353_00525 at 107.614 kb on - strand, within AO353_00525 at 107.614 kb on - strand, within AO353_00525 at 107.716 kb on + strand, within AO353_00525 at 107.716 kb on + strand, within AO353_00525 at 107.957 kb on + strand, within AO353_00525 at 107.958 kb on - strand, within AO353_00525 at 107.958 kb on - strand, within AO353_00525 at 108.249 kb on - strand, within AO353_00525 at 108.565 kb on + strand, within AO353_00525 at 108.565 kb on + strand, within AO353_00525 at 108.566 kb on - strand, within AO353_00525 at 108.566 kb on - strand, within AO353_00525 at 108.654 kb on + strand, within AO353_00525 at 108.822 kb on - strand at 108.822 kb on - strand at 108.896 kb on + strand at 108.897 kb on - strand at 108.897 kb on - strand at 108.970 kb on + strand at 109.014 kb on + strand at 109.015 kb on - strand at 109.019 kb on + strand at 109.019 kb on + strand at 109.020 kb on - strand at 109.020 kb on - strand at 109.021 kb on + strand at 109.021 kb on + strand at 109.022 kb on - strand at 109.022 kb on - strand at 109.022 kb on - strand at 109.022 kb on - strand at 109.026 kb on - strand at 109.176 kb on + strand at 109.176 kb on + strand at 109.177 kb on - strand at 109.179 kb on + strand at 109.179 kb on + strand at 109.179 kb on + strand at 109.180 kb on - strand at 109.180 kb on - strand at 109.225 kb on - strand at 109.270 kb on - strand at 109.431 kb on + strand, within AO353_00530 at 109.431 kb on + strand, within AO353_00530 at 109.431 kb on + strand, within AO353_00530 at 109.431 kb on + strand, within AO353_00530 at 109.432 kb on - strand, within AO353_00530 at 109.432 kb on - strand, within AO353_00530 at 109.432 kb on - strand, within AO353_00530 at 109.432 kb on - strand, within AO353_00530 at 109.434 kb on + strand, within AO353_00530 at 109.434 kb on + strand, within AO353_00530 at 109.482 kb on + strand, within AO353_00530 at 109.482 kb on + strand, within AO353_00530 at 109.483 kb on - strand, within AO353_00530 at 109.483 kb on - strand, within AO353_00530 at 109.516 kb on - strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.659 kb on + strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.660 kb on - strand, within AO353_00530 at 109.717 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530 at 109.866 kb on + strand, within AO353_00530
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.0625 vol% remove 105,994 - -0.3 106,157 - AO353_00515 0.84 +1.7 106,228 + +0.4 106,228 + -1.7 106,228 + +1.1 106,228 + +0.7 106,228 + +0.7 106,228 + +0.8 106,228 + -0.3 106,229 - +0.7 106,229 - -1.2 106,235 - -0.9 106,235 - -1.8 106,296 + +1.5 106,296 + -0.2 106,296 + +0.1 106,296 + +0.2 106,296 + +0.4 106,296 + +0.4 106,296 + +0.1 106,296 + +0.2 106,296 + -0.7 106,297 - -0.3 106,297 - -0.3 106,297 - +0.3 106,297 - -0.7 106,300 + +1.3 106,300 + -0.7 106,300 + -0.2 106,347 + +1.0 106,347 + -1.9 106,347 + +2.0 106,347 + -0.7 106,347 + -0.3 106,348 - +0.7 106,348 - +0.3 106,348 - -0.2 106,348 - -0.2 106,348 - -0.3 106,361 + +1.8 106,361 + -0.6 106,368 - -0.7 106,368 - -0.7 106,368 - -0.2 106,446 + AO353_00520 0.26 -0.3 106,447 - AO353_00520 0.26 +0.7 106,447 - AO353_00520 0.26 +0.1 106,447 - AO353_00520 0.26 +0.1 106,447 - AO353_00520 0.26 +0.7 106,561 + AO353_00520 0.52 +0.7 106,561 + AO353_00520 0.52 +0.4 106,561 + AO353_00520 0.52 +1.2 106,582 + AO353_00520 0.57 -0.3 106,583 - AO353_00520 0.57 -1.7 106,598 - AO353_00520 0.61 -0.3 106,626 + AO353_00520 0.67 +0.4 106,626 + AO353_00520 0.67 +1.4 106,626 + AO353_00520 0.67 -0.7 106,626 + AO353_00520 0.67 +0.8 106,627 - AO353_00520 0.67 -0.3 106,627 - AO353_00520 0.67 -1.7 106,627 - AO353_00520 0.67 +0.0 106,772 + +0.4 106,772 + -1.6 106,772 + +0.7 106,772 + +1.1 106,772 + -1.9 106,772 + -0.9 106,773 - +0.4 106,773 - +1.7 106,773 - -0.6 106,795 + -1.5 106,795 + -1.7 106,795 + +0.7 106,795 + +0.2 106,795 + -0.1 106,796 - +0.6 106,796 - -0.1 106,796 - -1.3 106,796 - +0.2 106,826 + +0.0 106,827 - +1.2 106,827 - -1.7 106,880 + -0.3 106,880 + -0.3 106,880 + -0.7 106,881 - +1.1 106,916 + -0.2 106,916 + +0.7 106,917 - -1.7 106,983 + -0.5 106,984 - +0.1 106,984 - -0.0 107,053 + +0.7 107,053 + -0.8 107,053 + -0.6 107,054 - +0.7 107,054 - +1.0 107,054 - -0.3 107,054 - +2.2 107,152 + AO353_00525 0.11 -0.1 107,152 + AO353_00525 0.11 +0.7 107,152 + AO353_00525 0.11 -0.5 107,152 + AO353_00525 0.11 +0.3 107,152 + AO353_00525 0.11 -1.1 107,153 - AO353_00525 0.11 -0.6 107,153 - AO353_00525 0.11 -0.1 107,153 - AO353_00525 0.11 -0.5 107,153 - AO353_00525 0.11 -0.3 107,153 - AO353_00525 0.11 -0.9 107,153 - AO353_00525 0.11 -1.3 107,153 - AO353_00525 0.11 -0.2 107,317 + AO353_00525 0.19 -0.6 107,317 + AO353_00525 0.19 -0.1 107,317 + AO353_00525 0.19 -0.9 107,484 + AO353_00525 0.28 +0.4 107,485 - AO353_00525 0.28 -1.3 107,613 + AO353_00525 0.35 +0.2 107,613 + AO353_00525 0.35 -1.0 107,613 + AO353_00525 0.35 +0.5 107,614 - AO353_00525 0.35 -1.3 107,614 - AO353_00525 0.35 -1.7 107,614 - AO353_00525 0.35 -0.9 107,614 - AO353_00525 0.35 +0.8 107,716 + AO353_00525 0.40 +1.7 107,716 + AO353_00525 0.40 +1.0 107,957 + AO353_00525 0.53 +0.3 107,958 - AO353_00525 0.53 -0.2 107,958 - AO353_00525 0.53 -0.3 108,249 - AO353_00525 0.68 +2.0 108,565 + AO353_00525 0.84 -1.5 108,565 + AO353_00525 0.84 -2.3 108,566 - AO353_00525 0.84 -1.3 108,566 - AO353_00525 0.84 -0.7 108,654 + AO353_00525 0.89 +1.2 108,822 - +1.1 108,822 - +1.8 108,896 + -0.8 108,897 - +1.7 108,897 - +0.2 108,970 + -0.3 109,014 + -0.4 109,015 - +0.1 109,019 + -0.1 109,019 + -1.2 109,020 - +0.1 109,020 - +0.7 109,021 + -2.7 109,021 + +0.9 109,022 - -0.5 109,022 - -0.6 109,022 - -0.3 109,022 - +1.3 109,026 - +0.0 109,176 + -0.2 109,176 + -0.8 109,177 - +1.5 109,179 + -0.9 109,179 + +0.4 109,179 + +0.7 109,180 - -0.3 109,180 - +0.6 109,225 - +0.3 109,270 - -1.1 109,431 + AO353_00530 0.18 -0.9 109,431 + AO353_00530 0.18 +0.9 109,431 + AO353_00530 0.18 -0.2 109,431 + AO353_00530 0.18 +0.5 109,432 - AO353_00530 0.18 -0.7 109,432 - AO353_00530 0.18 -0.3 109,432 - AO353_00530 0.18 +0.2 109,432 - AO353_00530 0.18 -1.9 109,434 + AO353_00530 0.18 +0.0 109,434 + AO353_00530 0.18 +0.7 109,482 + AO353_00530 0.21 -0.8 109,482 + AO353_00530 0.21 +0.7 109,483 - AO353_00530 0.21 +0.3 109,483 - AO353_00530 0.21 +1.7 109,516 - AO353_00530 0.23 -0.8 109,659 + AO353_00530 0.30 +1.1 109,659 + AO353_00530 0.30 +0.8 109,659 + AO353_00530 0.30 +1.2 109,659 + AO353_00530 0.30 -0.2 109,659 + AO353_00530 0.30 +1.1 109,659 + AO353_00530 0.30 +0.3 109,659 + AO353_00530 0.30 +0.9 109,659 + AO353_00530 0.30 -0.3 109,659 + AO353_00530 0.30 -1.9 109,660 - AO353_00530 0.30 -0.7 109,660 - AO353_00530 0.30 +1.2 109,660 - AO353_00530 0.30 -1.5 109,660 - AO353_00530 0.30 +0.0 109,660 - AO353_00530 0.30 +0.9 109,660 - AO353_00530 0.30 -0.0 109,660 - AO353_00530 0.30 -1.3 109,717 + AO353_00530 0.33 -0.3 109,866 + AO353_00530 0.41 -0.2 109,866 + AO353_00530 0.41 -1.5 109,866 + AO353_00530 0.41 +0.2 109,866 + AO353_00530 0.41 +1.7 109,866 + AO353_00530 0.41 -1.3 109,866 + AO353_00530 0.41 +1.2 109,866 + AO353_00530 0.41 -1.2 109,866 + AO353_00530 0.41 +2.1 109,866 + AO353_00530 0.41 -1.9
Or see this region's nucleotide sequence