Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6071

Experiment: N1B4wt with N2E2m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E2m denitrifying replicate C
6,890,721	+				+0.4
6,890,721	+				-0.2
6,890,721	+				+1.4
6,890,722	-				+0.6
6,890,972	-		Pf6N2E2_6069	0.36	-0.0
6,890,972	-		Pf6N2E2_6069	0.36	-0.2
6,891,139	+		Pf6N2E2_6069	0.65	-0.4
6,891,139	+		Pf6N2E2_6069	0.65	+0.9
6,891,140	-		Pf6N2E2_6069	0.65	-1.3
6,891,280	+		Pf6N2E2_6069	0.90	+1.3
6,891,280	+		Pf6N2E2_6069	0.90	-0.6
6,891,280	+		Pf6N2E2_6069	0.90	+1.2
6,891,280	+		Pf6N2E2_6069	0.90	+0.1
6,891,280	+		Pf6N2E2_6069	0.90	-0.3
6,891,281	-				-0.3
6,891,281	-				+0.9
6,891,402	+		Pf6N2E2_6070	0.20	+0.5
6,891,402	+		Pf6N2E2_6070	0.20	+0.9
6,891,403	-		Pf6N2E2_6070	0.21	+0.5
6,891,403	-		Pf6N2E2_6070	0.21	+0.3
6,891,403	-		Pf6N2E2_6070	0.21	-0.0
6,891,888	-		Pf6N2E2_6071	0.42	-0.1
6,891,888	-		Pf6N2E2_6071	0.42	-2.0
6,891,888	-		Pf6N2E2_6071	0.42	-0.5
6,891,910	-		Pf6N2E2_6071	0.46	+0.7
6,892,085	+		Pf6N2E2_6071	0.79	-0.7
6,892,085	+		Pf6N2E2_6071	0.79	-1.2
6,892,086	-		Pf6N2E2_6071	0.79	-0.8
6,892,498	+		Pf6N2E2_6072	0.25	-0.3
6,892,522	+		Pf6N2E2_6072	0.27	-0.3
6,892,522	+		Pf6N2E2_6072	0.27	-0.5
6,892,522	+		Pf6N2E2_6072	0.27	+0.2
6,892,523	-		Pf6N2E2_6072	0.27	-1.6
6,892,567	+		Pf6N2E2_6072	0.30	-2.3
6,892,817	+		Pf6N2E2_6072	0.51	-0.4
6,892,818	-		Pf6N2E2_6072	0.51	-1.4
6,892,909	+		Pf6N2E2_6072	0.59	+0.1
6,892,909	+		Pf6N2E2_6072	0.59	+0.9
6,892,909	+		Pf6N2E2_6072	0.59	-0.3
6,892,909	+		Pf6N2E2_6072	0.59	-0.6
6,892,910	-		Pf6N2E2_6072	0.59	-1.1
6,892,969	+		Pf6N2E2_6072	0.64	-0.3
6,892,984	+		Pf6N2E2_6072	0.65	+0.8
6,892,984	+		Pf6N2E2_6072	0.65	+0.0
6,892,984	+		Pf6N2E2_6072	0.65	-0.1
6,892,985	-		Pf6N2E2_6072	0.65	-0.5
6,893,080	+		Pf6N2E2_6072	0.73	+0.5
6,893,092	+		Pf6N2E2_6072	0.74	+0.1
6,893,092	+		Pf6N2E2_6072	0.74	-0.6
6,893,092	+		Pf6N2E2_6072	0.74	+0.4
6,893,092	+		Pf6N2E2_6072	0.74	-0.4
6,893,092	+		Pf6N2E2_6072	0.74	-0.3