Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5254

Experiment: N1B4wt with N2E2m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E2m denitrifying replicate C
6,045,644	+				+0.4
6,045,644	+				+0.4
6,045,760	+				+0.7
6,045,760	+				-0.5
6,045,760	+				+0.4
6,045,760	+				-0.1
6,045,760	+				-0.1
6,045,761	-				-0.2
6,045,761	-				-0.3
6,045,761	-				-1.0
6,045,761	-				+1.2
6,045,761	-				-0.2
6,045,761	-				+1.1
6,045,761	-				-0.3
6,045,761	-				-0.3
6,045,761	-				+0.4
6,045,761	-				+0.2
6,045,938	+		Pf6N2E2_5253	0.23	-0.8
6,046,113	+		Pf6N2E2_5253	0.47	+0.2
6,046,113	+		Pf6N2E2_5253	0.47	-0.4
6,046,113	+		Pf6N2E2_5253	0.47	-1.1
6,046,114	-		Pf6N2E2_5253	0.47	-0.5
6,046,114	-		Pf6N2E2_5253	0.47	+0.3
6,046,114	-		Pf6N2E2_5253	0.47	+0.1
6,046,114	-		Pf6N2E2_5253	0.47	-0.1
6,046,128	+		Pf6N2E2_5253	0.49	-0.6
6,046,128	+		Pf6N2E2_5253	0.49	+0.3
6,046,129	-		Pf6N2E2_5253	0.49	+0.2
6,046,129	-		Pf6N2E2_5253	0.49	-0.7
6,046,138	+		Pf6N2E2_5253	0.51	-1.0
6,046,138	+		Pf6N2E2_5253	0.51	-0.1
6,046,138	+		Pf6N2E2_5253	0.51	-0.6
6,046,139	-		Pf6N2E2_5253	0.51	-0.1
6,046,139	-		Pf6N2E2_5253	0.51	+0.4
6,046,139	-		Pf6N2E2_5253	0.51	-0.8
6,046,139	-		Pf6N2E2_5253	0.51	-1.0
6,046,292	+		Pf6N2E2_5253	0.72	-0.1
6,046,326	+		Pf6N2E2_5253	0.77	-0.1
6,046,326	+		Pf6N2E2_5253	0.77	+0.5
6,046,326	+		Pf6N2E2_5253	0.77	+0.3
6,046,327	-		Pf6N2E2_5253	0.77	-1.3
6,046,386	+		Pf6N2E2_5253	0.85	+0.6
6,046,386	+		Pf6N2E2_5253	0.85	-0.3
6,046,505	-				+0.7
6,046,505	-				-0.2
6,046,505	-				+1.2
6,046,505	-				-0.4
6,046,506	+				-1.4
6,046,506	+				+1.2
6,046,506	+				+0.7
6,046,506	+				+0.7
6,046,506	+				+0.9
6,046,506	+				+1.0
6,046,507	-				+0.1
6,046,507	-				+0.7
6,046,507	-				+0.3
6,046,561	+				+0.0
6,046,561	+				+0.9
6,046,571	-				+0.4
6,046,571	-				-0.4
6,046,571	-				+0.4
6,046,583	-				+0.2
6,046,583	-				-1.2
6,046,583	-				-1.3
6,046,585	+				+1.1
6,046,645	+				-0.2
6,046,645	+				-0.4
6,046,645	+				-0.3
6,046,645	+				-0.1
6,046,645	+				+0.3
6,046,645	+				-0.3
6,046,646	-				-0.3
6,046,646	-				-0.0
6,046,646	-				+0.8
6,046,646	-				-0.5
6,046,672	+				+0.2
6,046,723	+		Pf6N2E2_5254	0.10	-1.3
6,046,723	+		Pf6N2E2_5254	0.10	+0.9
6,046,723	+				+0.3
6,046,723	+		Pf6N2E2_5254	0.10	+0.8
6,046,723	+		Pf6N2E2_5254	0.10	+0.7
6,046,723	+		Pf6N2E2_5254	0.10	+0.1
6,046,723	+		Pf6N2E2_5254	0.10	+0.3
6,046,724	-		Pf6N2E2_5254	0.10	-0.4
6,046,724	-		Pf6N2E2_5254	0.10	-0.3
6,046,724	-		Pf6N2E2_5254	0.10	+1.5
6,046,777	+		Pf6N2E2_5254	0.13	+0.6
6,046,778	-		Pf6N2E2_5254	0.13	+0.5
6,046,778	-		Pf6N2E2_5254	0.13	+0.9
6,046,873	+		Pf6N2E2_5254	0.18	+0.2
6,046,873	+		Pf6N2E2_5254	0.18	-0.1
6,046,873	+		Pf6N2E2_5254	0.18	-0.6
6,046,873	+		Pf6N2E2_5254	0.18	-0.7
6,046,873	+		Pf6N2E2_5254	0.18	-0.9
6,046,873	+		Pf6N2E2_5254	0.18	+0.7
6,046,873	+		Pf6N2E2_5254	0.18	+0.7
6,046,873	+		Pf6N2E2_5254	0.18	+0.2
6,046,873	+		Pf6N2E2_5254	0.18	+0.2
6,046,873	+		Pf6N2E2_5254	0.18	+0.4
6,046,874	-		Pf6N2E2_5254	0.18	-0.0
6,046,874	-		Pf6N2E2_5254	0.18	+0.4
6,046,874	-		Pf6N2E2_5254	0.18	-0.4
6,046,874	-		Pf6N2E2_5254	0.18	+0.7
6,046,879	+		Pf6N2E2_5254	0.18	+0.5
6,046,880	-		Pf6N2E2_5254	0.18	-0.7
6,047,189	-		Pf6N2E2_5254	0.33	+0.9
6,047,189	-		Pf6N2E2_5254	0.33	-0.2
6,047,281	+		Pf6N2E2_5254	0.37	-0.6
6,047,282	-		Pf6N2E2_5254	0.37	+0.7
6,047,282	-		Pf6N2E2_5254	0.37	-1.0
6,047,355	+		Pf6N2E2_5254	0.40	+0.1
6,047,355	+		Pf6N2E2_5254	0.40	-0.5
6,047,355	+		Pf6N2E2_5254	0.40	-1.6
6,047,355	+		Pf6N2E2_5254	0.40	+0.1
6,047,356	-		Pf6N2E2_5254	0.41	-0.3
6,047,356	-		Pf6N2E2_5254	0.41	-0.1
6,047,356	-		Pf6N2E2_5254	0.41	-1.6
6,047,356	-		Pf6N2E2_5254	0.41	-1.3
6,047,410	+		Pf6N2E2_5254	0.43	+0.7
6,047,411	-		Pf6N2E2_5254	0.43	-0.9
6,047,422	+		Pf6N2E2_5254	0.44	+0.9
6,047,422	+		Pf6N2E2_5254	0.44	-0.3
6,047,422	+		Pf6N2E2_5254	0.44	-0.2
6,047,422	+		Pf6N2E2_5254	0.44	+0.4
6,047,422	+		Pf6N2E2_5254	0.44	+0.3
6,047,423	-		Pf6N2E2_5254	0.44	-0.3
6,047,423	-		Pf6N2E2_5254	0.44	-0.2
6,047,438	-		Pf6N2E2_5254	0.44	+1.3
6,047,488	+		Pf6N2E2_5254	0.47	+0.6
6,047,488	+		Pf6N2E2_5254	0.47	+0.7
6,047,671	+		Pf6N2E2_5254	0.55	+0.7
6,047,671	+		Pf6N2E2_5254	0.55	-0.1
6,047,671	+		Pf6N2E2_5254	0.55	+0.7
6,047,672	-		Pf6N2E2_5254	0.56	+1.4
6,047,672	-		Pf6N2E2_5254	0.56	-0.3
6,047,672	-		Pf6N2E2_5254	0.56	+1.9
6,047,688	+		Pf6N2E2_5254	0.56	+0.2
6,047,689	-		Pf6N2E2_5254	0.56	+0.2
6,047,689	-		Pf6N2E2_5254	0.56	+1.8
6,047,954	+		Pf6N2E2_5254	0.69	-0.7
6,047,954	+		Pf6N2E2_5254	0.69	-0.9
6,047,954	+		Pf6N2E2_5254	0.69	+0.5
6,047,955	-		Pf6N2E2_5254	0.69	-0.2
6,047,955	-		Pf6N2E2_5254	0.69	+1.2
6,047,955	-		Pf6N2E2_5254	0.69	-0.5
6,047,955	-		Pf6N2E2_5254	0.69	-0.7
6,047,955	-		Pf6N2E2_5254	0.69	-0.3
6,047,955	-		Pf6N2E2_5254	0.69	+0.7
6,047,955	-		Pf6N2E2_5254	0.69	+2.1
6,047,955	-		Pf6N2E2_5254	0.69	-0.3
6,048,108	+		Pf6N2E2_5254	0.76	-0.0
6,048,108	+		Pf6N2E2_5254	0.76	-1.1
6,048,108	+		Pf6N2E2_5254	0.76	-0.1
6,048,108	+		Pf6N2E2_5254	0.76	-0.1
6,048,108	+		Pf6N2E2_5254	0.76	+0.2
6,048,108	+		Pf6N2E2_5254	0.76	+0.9
6,048,108	+		Pf6N2E2_5254	0.76	+1.0
6,048,108	+		Pf6N2E2_5254	0.76	+0.7
6,048,108	+		Pf6N2E2_5254	0.76	-0.1
6,048,108	+		Pf6N2E2_5254	0.76	-0.1
6,048,108	+		Pf6N2E2_5254	0.76	+0.6
6,048,108	+		Pf6N2E2_5254	0.76	-1.7
6,048,108	+		Pf6N2E2_5254	0.76	+0.6
6,048,109	-		Pf6N2E2_5254	0.76	+0.2
6,048,109	-		Pf6N2E2_5254	0.76	+0.2
6,048,109	-		Pf6N2E2_5254	0.76	-0.2
6,048,109	-		Pf6N2E2_5254	0.76	+0.2
6,048,109	-		Pf6N2E2_5254	0.76	+0.3
6,048,109	-		Pf6N2E2_5254	0.76	+0.4
6,048,109	-		Pf6N2E2_5254	0.76	+0.7
6,048,109	-		Pf6N2E2_5254	0.76	-0.5
6,048,109	-		Pf6N2E2_5254	0.76	+1.0
6,048,109	-		Pf6N2E2_5254	0.76	-0.1
6,048,142	+		Pf6N2E2_5254	0.78	-0.5
6,048,168	+		Pf6N2E2_5254	0.79	+0.6
6,048,168	+		Pf6N2E2_5254	0.79	+0.2
6,048,168	+		Pf6N2E2_5254	0.79	+0.3
6,048,169	-		Pf6N2E2_5254	0.79	+0.7
6,048,241	+		Pf6N2E2_5254	0.83	+0.3
6,048,241	+		Pf6N2E2_5254	0.83	-1.2
6,048,241	+		Pf6N2E2_5254	0.83	+0.0
6,048,241	+		Pf6N2E2_5254	0.83	-0.0
6,048,274	+		Pf6N2E2_5254	0.84	-0.3
6,048,274	+		Pf6N2E2_5254	0.84	-0.2
6,048,274	+		Pf6N2E2_5254	0.84	-0.7
6,048,275	-		Pf6N2E2_5254	0.84	-0.3
6,048,275	-		Pf6N2E2_5254	0.84	-0.5
6,048,275	-		Pf6N2E2_5254	0.84	+0.7
6,048,275	-		Pf6N2E2_5254	0.84	+2.0
6,048,275	-		Pf6N2E2_5254	0.84	-0.4
6,048,281	-		Pf6N2E2_5254	0.84	+0.4
6,048,281	-		Pf6N2E2_5254	0.84	-0.4
6,048,328	+		Pf6N2E2_5254	0.87	-0.1
6,048,490	+				+0.3
6,048,545	-				-0.1
6,048,611	+				+0.3
6,048,611	+				+0.1
6,048,611	+				+0.6
6,048,612	-				-0.4
6,048,643	-				+0.1
6,048,730	+				+0.9
6,048,730	+				+1.5
6,048,731	-				+0.1
6,048,731	-				-0.1
6,048,731	-				-0.9
6,048,756	-				+0.4
6,048,756	-				+0.0
6,048,756	-				-0.2
6,048,782	+				+0.3
6,048,783	-				+0.3
6,049,431	+		Pf6N2E2_5255	0.45	-0.5
6,049,431	+		Pf6N2E2_5255	0.45	+0.2
6,049,431	+		Pf6N2E2_5255	0.45	+0.5
6,049,431	+		Pf6N2E2_5255	0.45	+0.6
6,049,432	-		Pf6N2E2_5255	0.45	-0.7
6,049,432	-		Pf6N2E2_5255	0.45	-0.1
6,049,432	-		Pf6N2E2_5255	0.45	+0.1
6,049,432	-		Pf6N2E2_5255	0.45	+0.7
6,049,432	-		Pf6N2E2_5255	0.45	-0.6