Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1877

Experiment: N1B4wt with N2E2m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E2m denitrifying replicate C
2,225,113	-		Pf6N2E2_1876	0.50	+0.7
2,225,230	-		Pf6N2E2_1876	0.59	-0.5
2,225,372	-		Pf6N2E2_1876	0.69	+0.9
2,225,542	-		Pf6N2E2_1876	0.81	+0.7
2,225,868	-				-0.1
2,225,870	-				-0.1
2,225,953	-		Pf6N2E2_1877	0.11	-0.9
2,226,071	-		Pf6N2E2_1877	0.21	+0.7
2,226,534	+		Pf6N2E2_1877	0.60	-0.9
2,226,654	+		Pf6N2E2_1877	0.70	-0.8
2,226,654	+		Pf6N2E2_1877	0.70	-1.5
2,226,654	+		Pf6N2E2_1877	0.70	+0.4
2,226,654	+		Pf6N2E2_1877	0.70	-0.7
2,226,655	-		Pf6N2E2_1877	0.70	-0.9
2,227,200	+				-0.3
2,227,200	+				-1.5
2,227,225	-				-0.4
2,227,361	+				+1.1
2,227,379	-				-0.3
2,227,379	-				+0.4
2,227,453	+				-0.2
2,227,458	+				+0.6
2,227,458	+				-0.7
2,227,517	-				+0.2
2,227,517	-				-0.0
2,227,643	+				-0.7
2,227,644	-				-1.0
2,227,644	-				+0.2
2,227,867	+				-0.3
2,227,900	+				-0.6
2,227,924	+				-0.2