Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5257

Experiment: Cephalothin 2.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2.5 mg/ml
15,028	+		Pf1N1B4_5255	0.44	+0.7
15,073	+		Pf1N1B4_5255	0.64	+0.6
15,074	-		Pf1N1B4_5255	0.65	-1.2
15,125	+		Pf1N1B4_5255	0.88	-0.8
15,126	-		Pf1N1B4_5255	0.88	+0.0
15,126	-		Pf1N1B4_5255	0.88	+0.0
15,126	-		Pf1N1B4_5255	0.88	-1.0
15,249	-				-0.5
15,298	-				-1.0
15,303	+				+1.0
15,332	+		Pf1N1B4_5256	0.19	-0.4
15,333	-		Pf1N1B4_5256	0.19	-1.0
15,498	+				-0.5
15,498	+				+1.2
15,498	+				+0.6
15,498	+				+0.4
15,498	+				-0.1
15,498	+				+0.8
15,499	-				+1.4
15,499	-				-0.5
15,581	-				-1.2
15,604	+				-1.5
15,757	+				+0.0
15,758	-				-0.6
15,758	-				+1.4
15,794	+				-0.0
15,794	+				+0.5
15,889	+				+0.9
15,889	+				-0.5
15,889	+				+1.2
15,889	+				-0.7
15,889	+				-0.3
15,889	+				+0.4
15,889	+				+0.8
15,889	+				-2.0
15,889	+				+0.0
15,889	+				-0.2
15,890	-				-0.2
15,890	-				+0.6
15,890	-				-0.4
15,890	-				+0.0
15,890	-				-0.7
15,890	-				+0.4
15,890	-				+0.4
15,890	-				+0.0
15,890	-				+0.0
16,037	+		Pf1N1B4_5257	0.10	-0.3
16,037	+		Pf1N1B4_5257	0.10	-2.3
16,037	+				+0.0
16,037	+		Pf1N1B4_5257	0.10	-0.5
16,038	-		Pf1N1B4_5257	0.10	-1.1
16,038	-		Pf1N1B4_5257	0.10	-0.7
16,038	-		Pf1N1B4_5257	0.10	-0.4
16,038	-		Pf1N1B4_5257	0.10	-2.3
16,213	+		Pf1N1B4_5257	0.69	+0.3
16,213	+		Pf1N1B4_5257	0.69	-1.4
16,213	+		Pf1N1B4_5257	0.69	-0.4
16,213	+		Pf1N1B4_5257	0.69	-1.0
16,214	-				+0.0
16,214	-		Pf1N1B4_5257	0.69	+0.0
16,268	+		Pf1N1B4_5257	0.87	-2.0
16,268	+		Pf1N1B4_5257	0.87	-0.5
16,280	+				+0.8
16,280	+				+0.6
16,280	+				-0.6
16,384	+				-1.5
16,384	+				-0.4
16,384	+				+0.8
16,409	+		Pf1N1B4_5258	0.12	+0.8
16,434	+		Pf1N1B4_5258	0.26	-1.0
16,435	-		Pf1N1B4_5258	0.26	+2.0
16,435	-		Pf1N1B4_5258	0.26	-1.0
16,435	-		Pf1N1B4_5258	0.26	+0.5
16,435	-		Pf1N1B4_5258	0.26	+0.6
16,435	-		Pf1N1B4_5258	0.26	+2.4
16,435	-		Pf1N1B4_5258	0.26	-1.3
16,509	+		Pf1N1B4_5258	0.65	-1.5
16,510	-		Pf1N1B4_5258	0.65	-1.0
16,510	-		Pf1N1B4_5258	0.65	+0.3
16,563	-				+1.8
16,575	-				+0.6
16,623	+				-1.2
16,623	+				+0.2
16,627	+				-1.0
16,627	+				-1.0
16,627	+				+0.6
16,627	+				-2.0
16,627	+				+0.8
16,627	+				+1.6
16,627	+				+0.0
16,628	-				-0.1
16,628	-				+1.0
16,648	+				-0.3
16,648	+				+0.0
16,676	+				+1.0
16,676	+				-0.1
16,676	+				-1.0
16,747	+				-0.1
16,761	+				+0.8
16,762	-				+1.8
16,809	-				-0.3
16,918	+				+1.0
16,918	+				+2.0
16,918	+				-2.0
16,918	+				-1.0
16,918	+				+1.3
16,919	-				-0.5
16,940	+		Pf1N1B4_5259	0.14	+0.4
16,940	+		Pf1N1B4_5259	0.14	+0.6
16,941	-		Pf1N1B4_5259	0.14	+1.0
16,941	-		Pf1N1B4_5259	0.14	-1.0
16,941	-		Pf1N1B4_5259	0.14	+0.7
17,150	+		Pf1N1B4_5259	0.72	-1.2
17,150	+		Pf1N1B4_5259	0.72	-1.3
17,150	+		Pf1N1B4_5259	0.72	+1.0
17,150	+		Pf1N1B4_5259	0.72	-1.7
17,150	+		Pf1N1B4_5259	0.72	-2.1
17,150	+		Pf1N1B4_5259	0.72	-0.6
17,150	+		Pf1N1B4_5259	0.72	+0.0
17,151	-		Pf1N1B4_5259	0.72	-1.3
17,151	-		Pf1N1B4_5259	0.72	-0.4
17,151	-		Pf1N1B4_5259	0.72	+0.0
17,151	-		Pf1N1B4_5259	0.72	-0.4
17,163	+		Pf1N1B4_5259	0.76	+0.6
17,164	-		Pf1N1B4_5259	0.76	+0.6
17,244	+				-1.5
17,244	+				-0.5
17,245	-				+0.4
17,268	+				+0.0