Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4828
Experiment: Cephalothin 2.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cephalothin 2.5 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,331,958 | + | +0.3 | |||
| 5,331,959 | - | -0.9 | |||
| 5,331,959 | - | +0.0 | |||
| 5,331,967 | + | -1.4 | |||
| 5,332,170 | - | -0.1 | |||
| 5,332,262 | + | -1.1 | |||
| 5,332,523 | + | -0.6 | |||
| 5,332,523 | + | Pf1N1B4_4827 | 0.55 | -3.1 | |
| 5,332,524 | - | Pf1N1B4_4827 | 0.55 | -0.6 | |
| 5,332,524 | - | Pf1N1B4_4827 | 0.55 | -0.6 | |
| 5,332,709 | + | Pf1N1B4_4827 | 0.75 | +1.0 | |
| 5,332,710 | - | -2.9 | |||
| 5,332,982 | - | Pf1N1B4_4828 | 0.16 | -1.6 | |
| 5,332,984 | - | Pf1N1B4_4828 | 0.17 | -0.7 | |
| 5,333,092 | - | -1.6 | |||
| 5,333,128 | - | Pf1N1B4_4828 | 0.64 | -0.1 | |
| 5,333,135 | + | Pf1N1B4_4828 | 0.66 | -0.9 | |
| 5,333,294 | + | -2.1 | |||
| 5,333,360 | + | Pf1N1B4_4829 | 0.12 | -1.6 | |
| 5,333,360 | + | +0.4 | |||
| 5,333,361 | - | +1.0 | |||
| 5,334,000 | + | Pf1N1B4_4829 | 0.76 | -1.0 | |
| 5,334,000 | + | Pf1N1B4_4829 | 0.76 | +2.0 | |
| 5,334,001 | - | Pf1N1B4_4829 | 0.76 | -1.6 | |
| 5,334,001 | - | Pf1N1B4_4829 | 0.76 | -0.0 |
Or see this region's nucleotide sequence