Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4116

Experiment: Cephalothin 2.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2.5 mg/ml
4,557,971	+				-1.4
4,557,972	-		Pf1N1B4_4113	0.86	-1.4
4,557,972	-		Pf1N1B4_4113	0.86	-0.4
4,558,062	-		Pf1N1B4_4114	0.20	+1.0
4,558,062	-		Pf1N1B4_4114	0.20	+1.2
4,558,554	+		Pf1N1B4_4115	0.63	-0.8
4,558,747	+				+0.1
4,558,830	-		Pf1N1B4_4116	0.11	-0.4
4,558,830	-		Pf1N1B4_4116	0.11	-0.4
4,558,900	+		Pf1N1B4_4116	0.20	-1.6
4,558,930	-				-1.9
4,558,930	-		Pf1N1B4_4116	0.24	-0.4
4,558,941	+				-0.0
4,558,942	-		Pf1N1B4_4116	0.26	+2.0
4,558,942	-		Pf1N1B4_4116	0.26	-0.9
4,559,063	-		Pf1N1B4_4116	0.42	-0.7
4,559,164	+		Pf1N1B4_4116	0.55	-0.8
4,559,164	+		Pf1N1B4_4116	0.55	-0.4
4,559,164	+		Pf1N1B4_4116	0.55	-1.4
4,559,165	-				+0.6
4,559,165	-		Pf1N1B4_4116	0.55	-0.9
4,559,361	-		Pf1N1B4_4116	0.81	+0.4
4,559,361	-		Pf1N1B4_4116	0.81	-1.9
4,559,546	-				-0.4
4,559,546	-				-1.6
4,559,546	-				+1.0
4,559,546	-				+0.1
4,559,554	-				+0.3
4,559,554	-				-1.2
4,559,589	-				-0.1
4,559,589	-				+0.8
4,559,612	+				-0.4
4,559,691	-		Pf1N1B4_4117	0.22	+0.6
4,559,932	+				-0.6
4,559,932	+				-1.4
4,559,932	+				-0.4
4,560,044	-				-0.4
4,560,076	+				+1.2
4,560,080	+				-2.5
4,560,080	+				-0.4
4,560,081	-				-0.4
4,560,090	+				+2.2
4,560,091	-				+0.2
4,560,149	+				-1.4
4,560,247	-				-0.4
4,560,247	-				-1.4
4,560,304	-				+0.1
4,560,352	-				+0.3
4,560,352	-				-1.9
4,560,355	+				-0.9
4,560,356	-				+1.2
4,560,356	-				+0.1