Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3685

Experiment: Cephalothin 2.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2.5 mg/ml
4,094,234	+		Pf1N1B4_3684	0.15	-2.8
4,094,305	+				+0.4
4,094,371	-		Pf1N1B4_3684	0.27	-1.2
4,094,380	+				-1.8
4,094,381	-		Pf1N1B4_3684	0.28	-1.2
4,094,600	+				+0.8
4,094,725	+		Pf1N1B4_3684	0.57	-0.2
4,094,737	-		Pf1N1B4_3684	0.58	+0.8
4,094,809	+		Pf1N1B4_3684	0.65	-1.8
4,094,809	+		Pf1N1B4_3684	0.65	-0.2
4,094,809	+		Pf1N1B4_3684	0.65	-2.5
4,094,809	+		Pf1N1B4_3684	0.65	-1.2
4,094,809	+		Pf1N1B4_3684	0.65	+0.1
4,094,809	+				-0.2
4,094,809	+		Pf1N1B4_3684	0.65	-1.8
4,094,809	+		Pf1N1B4_3684	0.65	+0.2
4,094,810	-		Pf1N1B4_3684	0.65	-1.1
4,094,810	-		Pf1N1B4_3684	0.65	+0.2
4,094,810	-		Pf1N1B4_3684	0.65	+0.8
4,094,810	-		Pf1N1B4_3684	0.65	-1.2
4,094,810	-				-0.2
4,094,810	-		Pf1N1B4_3684	0.65	-1.2
4,094,813	+		Pf1N1B4_3684	0.65	-0.2
4,094,813	+		Pf1N1B4_3684	0.65	+1.4
4,094,813	+		Pf1N1B4_3684	0.65	-0.9
4,094,813	+				-0.2
4,094,813	+		Pf1N1B4_3684	0.65	+1.4
4,094,814	-		Pf1N1B4_3684	0.65	-0.8
4,094,814	-		Pf1N1B4_3684	0.65	-0.6
4,094,814	-				+0.8
4,094,934	+		Pf1N1B4_3684	0.75	+0.8
4,094,982	+		Pf1N1B4_3684	0.79	-1.2
4,095,220	+				-1.0
4,095,220	+				-0.2
4,095,240	-				-0.5
4,095,254	+				+0.8
4,095,254	+				+0.8
4,095,255	-				+0.2
4,095,284	+				+1.6
4,095,337	+		Pf1N1B4_3685	0.13	-0.6
4,095,403	+				+0.8
4,095,403	+				-2.2
4,095,435	+		Pf1N1B4_3685	0.24	-1.2
4,095,435	+		Pf1N1B4_3685	0.24	-3.2
4,095,435	+		Pf1N1B4_3685	0.24	-0.8
4,095,435	+		Pf1N1B4_3685	0.24	+1.2
4,095,435	+		Pf1N1B4_3685	0.24	-1.2
4,095,525	-		Pf1N1B4_3685	0.34	-0.2
4,095,551	+		Pf1N1B4_3685	0.37	+1.4
4,095,552	-		Pf1N1B4_3685	0.37	-1.2
4,095,587	+		Pf1N1B4_3685	0.41	-2.2
4,095,587	+		Pf1N1B4_3685	0.41	-1.2
4,095,696	+		Pf1N1B4_3685	0.54	-0.2
4,095,697	-		Pf1N1B4_3685	0.54	-2.5
4,095,697	-		Pf1N1B4_3685	0.54	-0.8
4,095,882	+		Pf1N1B4_3685	0.75	-2.2
4,095,883	-		Pf1N1B4_3685	0.75	-0.8
4,096,101	+				-1.0
4,096,101	+				-0.2
4,096,101	+				+0.4
4,096,101	+				-0.2
4,096,101	+				-0.2
4,096,101	+				-0.5
4,096,101	+				-1.4
4,096,102	-				-1.8
4,096,102	-				-2.0
4,096,102	-				+1.0
4,096,102	-				-1.8
4,096,102	-				+0.8
4,096,115	-				-1.2
4,096,115	-				-1.8
4,096,306	+				+0.5
4,096,307	-				+0.2
4,096,307	-				-1.5
4,096,307	-				+1.4
4,096,307	-				-1.2
4,096,311	-				+1.4
4,096,311	-				-0.0
4,096,311	-				-0.2
4,096,341	+				-0.2
4,096,354	-				-1.2
4,096,431	-				-0.2
4,096,446	-				-2.5
4,096,446	-				-0.6
4,096,507	+				-1.8
4,096,508	-				-0.2
4,096,515	+				-0.4
4,096,516	-				+0.8
4,096,516	-				-0.2
4,096,567	-				+0.3
4,096,638	+				+0.8
4,096,789	+		Pf1N1B4_3686	0.20	-0.6
4,096,790	-		Pf1N1B4_3686	0.20	-0.2
4,096,790	-		Pf1N1B4_3686	0.20	-1.2
4,096,894	+		Pf1N1B4_3686	0.28	+3.0
4,096,894	+		Pf1N1B4_3686	0.28	-0.8
4,096,895	-		Pf1N1B4_3686	0.28	-2.2
4,096,895	-		Pf1N1B4_3686	0.28	+0.0
4,096,896	+		Pf1N1B4_3686	0.28	-0.2
4,096,896	+		Pf1N1B4_3686	0.28	+0.6
4,096,897	-		Pf1N1B4_3686	0.28	+1.0
4,096,897	-		Pf1N1B4_3686	0.28	+0.5
4,096,907	-		Pf1N1B4_3686	0.29	+2.6
4,097,062	+		Pf1N1B4_3686	0.41	-1.2
4,097,063	-		Pf1N1B4_3686	0.41	-2.0
4,097,063	-		Pf1N1B4_3686	0.41	-1.8
4,097,063	-		Pf1N1B4_3686	0.41	+0.7
4,097,091	+		Pf1N1B4_3686	0.43	-0.8
4,097,091	+		Pf1N1B4_3686	0.43	-0.8
4,097,092	-		Pf1N1B4_3686	0.43	-1.8
4,097,092	-		Pf1N1B4_3686	0.43	-1.8
4,097,092	-		Pf1N1B4_3686	0.43	-1.2
4,097,101	+		Pf1N1B4_3686	0.44	+0.5
4,097,102	-		Pf1N1B4_3686	0.44	-0.8