Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3595

Experiment: Cephalothin 2.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2.5 mg/ml
4,005,839	+				-0.7
4,005,839	+				+1.7
4,005,843	+				+0.1
4,005,843	+				+0.3
4,005,846	+				+0.7
4,005,930	-				-0.1
4,005,948	+				-1.1
4,005,948	+				+0.9
4,006,194	+		Pf1N1B4_3594	0.32	-2.5
4,006,195	-		Pf1N1B4_3594	0.32	-0.1
4,006,368	-		Pf1N1B4_3594	0.53	-0.1
4,006,503	+		Pf1N1B4_3594	0.69	+0.1
4,006,504	-		Pf1N1B4_3594	0.69	+0.3
4,006,504	-		Pf1N1B4_3594	0.69	+0.6
4,006,585	-		Pf1N1B4_3594	0.78	-0.4
4,006,766	-				-1.7
4,006,766	-				+1.2
4,006,768	+				+1.0
4,006,768	+				+0.8
4,006,768	+				-0.2
4,006,768	+				-1.0
4,006,768	+				+1.6
4,006,768	+				+0.4
4,006,768	+				-0.7
4,006,768	+				+2.4
4,006,768	+				-0.9
4,006,769	-				+1.8
4,006,819	+				+0.8
4,006,819	+				+0.8
4,006,820	-				-0.7
4,006,964	+		Pf1N1B4_3595	0.34	-0.2
4,007,159	+				+0.8
4,007,159	+		Pf1N1B4_3595	0.87	-1.7
4,007,160	-		Pf1N1B4_3595	0.88	-1.7
4,007,160	-		Pf1N1B4_3595	0.88	+0.2
4,007,218	+				+1.4
4,007,227	+				-1.2
4,007,227	+				-1.2
4,007,228	-				+0.1
4,007,246	+				+2.4
4,007,246	+				+1.4
4,007,247	-				-0.2
4,007,283	-				+2.7
4,007,283	-				-1.4
4,007,283	-				-1.5
4,007,343	+				-0.4
4,007,493	+		Pf1N1B4_3596	0.14	-1.7
4,007,494	-		Pf1N1B4_3596	0.14	-0.2
4,007,494	-		Pf1N1B4_3596	0.14	+0.2
4,007,519	-		Pf1N1B4_3596	0.16	-0.3
4,007,547	-		Pf1N1B4_3596	0.18	-0.2
4,007,587	+		Pf1N1B4_3596	0.21	-0.4
4,007,587	+		Pf1N1B4_3596	0.21	-0.7
4,007,587	+		Pf1N1B4_3596	0.21	-2.2
4,007,587	+		Pf1N1B4_3596	0.21	-0.2
4,007,587	+		Pf1N1B4_3596	0.21	+0.3
4,007,587	+		Pf1N1B4_3596	0.21	+0.8
4,007,588	-		Pf1N1B4_3596	0.21	+0.7
4,007,588	-		Pf1N1B4_3596	0.21	+0.3
4,007,588	-				-0.2
4,007,588	-		Pf1N1B4_3596	0.21	-0.5
4,007,588	-		Pf1N1B4_3596	0.21	-0.9
4,007,588	-		Pf1N1B4_3596	0.21	+1.7
4,007,588	-		Pf1N1B4_3596	0.21	-1.0
4,007,931	+				+0.8
4,007,932	-		Pf1N1B4_3596	0.45	-2.5
4,007,932	-		Pf1N1B4_3596	0.45	+0.0
4,007,932	-		Pf1N1B4_3596	0.45	-0.2
4,007,932	-		Pf1N1B4_3596	0.45	-0.9
4,008,009	+		Pf1N1B4_3596	0.50	+1.7
4,008,010	-		Pf1N1B4_3596	0.50	-0.8
4,008,010	-		Pf1N1B4_3596	0.50	-0.6
4,008,027	+		Pf1N1B4_3596	0.51	-0.5
4,008,027	+		Pf1N1B4_3596	0.51	-1.2
4,008,068	+		Pf1N1B4_3596	0.54	+0.1
4,008,068	+		Pf1N1B4_3596	0.54	+1.1
4,008,068	+		Pf1N1B4_3596	0.54	-0.7
4,008,068	+		Pf1N1B4_3596	0.54	+1.2
4,008,069	-		Pf1N1B4_3596	0.54	-0.6
4,008,069	-		Pf1N1B4_3596	0.54	-0.4
4,008,069	-		Pf1N1B4_3596	0.54	+3.3
4,008,139	+		Pf1N1B4_3596	0.59	-0.9
4,008,139	+		Pf1N1B4_3596	0.59	-0.7
4,008,140	-		Pf1N1B4_3596	0.59	-0.2
4,008,140	-		Pf1N1B4_3596	0.59	-0.1
4,008,140	-		Pf1N1B4_3596	0.59	-2.7
4,008,140	-		Pf1N1B4_3596	0.59	+0.3
4,008,140	-		Pf1N1B4_3596	0.59	-0.5
4,008,140	-		Pf1N1B4_3596	0.59	+0.8