Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3473

Experiment: Cephalothin 2.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2.5 mg/ml
3,877,576	+		Pf1N1B4_3471	0.80	+0.5
3,877,576	+		Pf1N1B4_3471	0.80	-0.1
3,877,576	+		Pf1N1B4_3471	0.80	-1.7
3,877,576	+		Pf1N1B4_3471	0.80	-0.1
3,877,576	+		Pf1N1B4_3471	0.80	-1.1
3,877,576	+		Pf1N1B4_3471	0.80	+0.6
3,877,576	+		Pf1N1B4_3471	0.80	-0.5
3,877,577	-		Pf1N1B4_3471	0.80	-0.3
3,877,577	-		Pf1N1B4_3471	0.80	-0.3
3,877,577	-		Pf1N1B4_3471	0.80	-2.4
3,877,577	-		Pf1N1B4_3471	0.80	+1.5
3,877,723	+				+1.1
3,877,724	-				-0.1
3,877,795	+				-0.1
3,877,795	+				+0.6
3,877,796	-				-0.2
3,877,796	-				-0.1
3,877,796	-				-0.1
3,877,796	-				-0.7
3,877,796	-				-0.1
3,877,796	-				-0.7
3,877,799	+				-1.7
3,877,799	+				-0.1
3,877,799	+				+0.9
3,877,799	+				+1.5
3,877,799	+				-0.0
3,877,800	-				+0.3
3,877,800	-				-0.1
3,877,800	-				+1.9
3,877,805	+				-1.1
3,877,935	-				-1.1
3,877,943	-				-0.1
3,878,216	+		Pf1N1B4_3472	0.27	+0.5
3,878,216	+		Pf1N1B4_3472	0.27	-1.1
3,878,217	-		Pf1N1B4_3472	0.27	-1.5
3,878,217	-		Pf1N1B4_3472	0.27	+0.9
3,878,217	-		Pf1N1B4_3472	0.27	+0.1
3,878,357	+		Pf1N1B4_3472	0.62	-0.9
3,878,357	+				-0.1
3,878,358	-		Pf1N1B4_3472	0.62	+0.4
3,878,358	-		Pf1N1B4_3472	0.62	+0.4
3,878,358	-		Pf1N1B4_3472	0.62	-0.5
3,878,358	-		Pf1N1B4_3472	0.62	+0.7
3,878,358	-		Pf1N1B4_3472	0.62	+0.5
3,878,424	-		Pf1N1B4_3472	0.78	-0.9
3,878,424	-		Pf1N1B4_3472	0.78	+0.0
3,878,424	-		Pf1N1B4_3472	0.78	+0.9
3,878,473	+				+0.1
3,878,473	+				-0.1
3,878,474	-				+0.1
3,878,491	-				-0.1
3,878,510	+				+1.2
3,878,510	+				+0.9
3,878,510	+				-0.1
3,878,510	+				-0.9
3,878,510	+				-0.8
3,878,510	+				-0.6
3,878,510	+				-0.7
3,878,510	+				+3.6
3,878,510	+				+0.9
3,878,510	+				-1.7
3,878,511	-				+0.5
3,878,511	-				+0.9
3,878,511	-				+0.9
3,878,511	-				+0.5
3,878,511	-				-1.4
3,878,511	-				+0.1
3,878,511	-				+0.8
3,878,511	-				-1.7
3,878,511	-				+0.6
3,878,511	-				+0.8
3,878,511	-				+1.2
3,878,511	-				+1.5
3,878,511	-				+0.9
3,878,639	+		Pf1N1B4_3473	0.28	-0.1
3,878,639	+				-0.1
3,878,640	-		Pf1N1B4_3473	0.28	+0.3
3,878,640	-		Pf1N1B4_3473	0.28	-0.3
3,878,640	-		Pf1N1B4_3473	0.28	-0.1
3,878,823	-		Pf1N1B4_3473	0.69	-0.1
3,878,828	+		Pf1N1B4_3473	0.70	+1.2
3,878,828	+		Pf1N1B4_3473	0.70	+0.4
3,878,828	+		Pf1N1B4_3473	0.70	+1.0
3,878,829	-		Pf1N1B4_3473	0.70	+0.7
3,878,960	+				-1.1
3,878,974	+				+1.7
3,878,974	+				+0.1
3,878,975	-				-1.1
3,878,975	-				-1.1
3,878,975	-				+1.2
3,878,975	-				+0.3
3,878,975	-				+0.6
3,878,975	-				-1.1
3,878,975	-				-0.2
3,879,226	+		Pf1N1B4_3474	0.36	+1.1
3,879,227	-		Pf1N1B4_3474	0.37	-0.5
3,879,230	+		Pf1N1B4_3474	0.37	-2.7
3,879,230	+		Pf1N1B4_3474	0.37	+0.9
3,879,230	+				+0.9
3,879,231	-		Pf1N1B4_3474	0.37	+1.1
3,879,231	-		Pf1N1B4_3474	0.37	+0.3
3,879,231	-		Pf1N1B4_3474	0.37	-2.1
3,879,231	-		Pf1N1B4_3474	0.37	-0.9
3,879,377	-		Pf1N1B4_3474	0.58	-0.9
3,879,491	-		Pf1N1B4_3474	0.75	-0.9
3,879,494	+				-2.1
3,879,494	+		Pf1N1B4_3474	0.75	-0.1
3,879,494	+		Pf1N1B4_3474	0.75	-1.7
3,879,494	+		Pf1N1B4_3474	0.75	-0.1
3,879,494	+		Pf1N1B4_3474	0.75	+0.9
3,879,494	+		Pf1N1B4_3474	0.75	-0.1
3,879,494	+		Pf1N1B4_3474	0.75	-0.1
3,879,494	+		Pf1N1B4_3474	0.75	+0.3
3,879,495	-		Pf1N1B4_3474	0.75	+0.6
3,879,495	-		Pf1N1B4_3474	0.75	+0.5
3,879,495	-		Pf1N1B4_3474	0.75	-0.2
3,879,495	-				-0.1
3,879,495	-		Pf1N1B4_3474	0.75	+1.5
3,879,495	-		Pf1N1B4_3474	0.75	-0.9
3,879,495	-		Pf1N1B4_3474	0.75	-0.5
3,879,495	-		Pf1N1B4_3474	0.75	-0.1
3,879,544	+		Pf1N1B4_3474	0.82	-1.1
3,879,544	+		Pf1N1B4_3474	0.82	+0.5
3,879,544	+		Pf1N1B4_3474	0.82	-1.7
3,879,544	+				-2.1
3,879,544	+				+0.5
3,879,544	+		Pf1N1B4_3474	0.82	+0.5
3,879,545	-		Pf1N1B4_3474	0.83	+0.9
3,879,545	-		Pf1N1B4_3474	0.83	-0.7
3,879,545	-		Pf1N1B4_3474	0.83	+0.3
3,879,545	-				+1.9
3,879,545	-		Pf1N1B4_3474	0.83	-0.3
3,879,545	-		Pf1N1B4_3474	0.83	+0.9
3,879,548	+		Pf1N1B4_3474	0.83	-2.4
3,879,548	+		Pf1N1B4_3474	0.83	+0.3
3,879,548	+		Pf1N1B4_3474	0.83	-0.5
3,879,548	+		Pf1N1B4_3474	0.83	-0.5
3,879,548	+		Pf1N1B4_3474	0.83	-0.1
3,879,549	-		Pf1N1B4_3474	0.83	+0.2
3,879,549	-		Pf1N1B4_3474	0.83	-0.1
3,879,549	-		Pf1N1B4_3474	0.83	-0.9
3,879,549	-		Pf1N1B4_3474	0.83	-0.7
3,879,549	-		Pf1N1B4_3474	0.83	-0.1
3,879,549	-		Pf1N1B4_3474	0.83	+1.9
3,879,549	-		Pf1N1B4_3474	0.83	-0.5
3,879,646	-				+0.7
3,879,646	-				-1.7
3,879,658	+				-0.5
3,879,658	+				-0.5
3,879,659	-				+0.9
3,879,659	-				+0.9
3,879,659	-				-1.7
3,879,659	-				+0.3
3,879,659	-				+0.5
3,879,660	+				-2.1
3,879,660	+				-0.4
3,879,660	+				-0.4
3,879,660	+				-0.1
3,879,661	-				-1.4
3,879,661	-				+0.6
3,879,661	-				+3.1
3,879,661	-				+0.7
3,879,661	-				-0.1
3,879,662	+				+0.6
3,879,662	+				-1.4
3,879,662	+				-1.4
3,879,662	+				+0.5
3,879,662	+				-1.4
3,879,662	+				-1.1
3,879,662	+				+0.2
3,879,662	+				+0.5
3,879,662	+				+1.9
3,879,662	+				-1.1
3,879,663	-				+1.2
3,879,663	-				-0.6
3,879,663	-				-1.1
3,879,663	-				-0.1
3,879,663	-				+0.5
3,879,663	-				+1.1
3,879,672	+				+1.2
3,879,673	-				+0.9
3,879,696	-				-1.7
3,879,696	-				+0.3
3,879,696	-				-0.5
3,879,696	-				+0.7
3,879,696	-				-0.7
3,879,696	-				-0.1
3,879,727	-				+1.5
3,879,727	-				+0.9
3,879,823	-				-2.4
3,879,823	-				-0.4