Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3232

Experiment: Cephalothin 2.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2.5 mg/ml
3,618,329	+		Pf1N1B4_3231	0.53	-0.5
3,618,329	+		Pf1N1B4_3231	0.53	-2.0
3,618,329	+		Pf1N1B4_3231	0.53	+0.7
3,618,330	-		Pf1N1B4_3231	0.53	-0.2
3,618,330	-		Pf1N1B4_3231	0.53	+0.8
3,618,330	-		Pf1N1B4_3231	0.53	-0.3
3,618,399	+				+1.6
3,618,399	+		Pf1N1B4_3231	0.58	-1.0
3,618,399	+		Pf1N1B4_3231	0.58	+1.2
3,618,399	+		Pf1N1B4_3231	0.58	-1.4
3,618,399	+		Pf1N1B4_3231	0.58	+1.3
3,618,399	+		Pf1N1B4_3231	0.58	-1.6
3,618,399	+		Pf1N1B4_3231	0.58	-2.0
3,618,432	+		Pf1N1B4_3231	0.60	-1.2
3,618,432	+		Pf1N1B4_3231	0.60	+0.4
3,618,432	+		Pf1N1B4_3231	0.60	+0.5
3,618,432	+		Pf1N1B4_3231	0.60	-0.0
3,618,432	+		Pf1N1B4_3231	0.60	+0.4
3,618,432	+		Pf1N1B4_3231	0.60	-0.3
3,618,432	+		Pf1N1B4_3231	0.60	-0.6
3,618,433	-		Pf1N1B4_3231	0.60	+1.7
3,618,433	-		Pf1N1B4_3231	0.60	-0.0
3,618,433	-		Pf1N1B4_3231	0.60	-0.0
3,618,433	-		Pf1N1B4_3231	0.60	+1.6
3,618,433	-		Pf1N1B4_3231	0.60	-1.6
3,618,456	+		Pf1N1B4_3231	0.62	+1.6
3,618,457	-		Pf1N1B4_3231	0.62	+1.0
3,618,625	+		Pf1N1B4_3231	0.75	+0.4
3,618,625	+		Pf1N1B4_3231	0.75	-0.3
3,618,625	+		Pf1N1B4_3231	0.75	-0.8
3,618,626	-		Pf1N1B4_3231	0.75	+0.1
3,618,646	-		Pf1N1B4_3231	0.76	-0.7
3,618,759	+		Pf1N1B4_3231	0.85	-0.2
3,619,170	+				-1.0
3,619,212	-				-1.0
3,619,228	-				-2.6
3,619,417	+		Pf1N1B4_3232	0.20	+1.6
3,619,418	-		Pf1N1B4_3232	0.20	+0.9
3,619,418	-		Pf1N1B4_3232	0.20	-0.0
3,619,418	-		Pf1N1B4_3232	0.20	+2.3
3,619,579	+		Pf1N1B4_3232	0.38	-0.4
3,619,580	-		Pf1N1B4_3232	0.39	-0.6
3,619,580	-		Pf1N1B4_3232	0.39	+1.4
3,619,624	+		Pf1N1B4_3232	0.44	+2.0
3,619,920	-		Pf1N1B4_3232	0.78	-0.2
3,619,978	+		Pf1N1B4_3232	0.85	+0.2
3,619,978	+		Pf1N1B4_3232	0.85	+2.0
3,619,978	+				-1.3
3,619,979	-		Pf1N1B4_3232	0.85	-0.8
3,619,979	-		Pf1N1B4_3232	0.85	+1.4
3,620,038	+				-1.3
3,620,038	+				+1.2
3,620,038	+				+0.0
3,620,038	+				-1.6
3,620,038	+				+1.2
3,620,038	+				+0.4
3,620,038	+				-0.0
3,620,039	-				+2.0
3,620,039	-				-0.5
3,620,039	-				+1.0
3,620,039	-				-2.3
3,620,104	+				-2.0
3,620,104	+				+1.6
3,620,104	+				-0.0
3,620,105	-				-1.6
3,620,105	-				-1.8
3,620,105	-				+0.3
3,620,112	+				-1.0
3,620,112	+				-0.0
3,620,112	+				+2.6
3,620,113	-				-1.6
3,620,113	-				-1.6
3,620,113	-				+1.0
3,620,113	-				-1.6
3,620,113	-				-0.0
3,620,113	-				-1.6
3,620,113	-				-0.0
3,620,239	+		Pf1N1B4_3233	0.17	+0.7
3,620,239	+				+2.3
3,620,239	+		Pf1N1B4_3233	0.17	+0.3
3,620,239	+		Pf1N1B4_3233	0.17	+0.4
3,620,240	-		Pf1N1B4_3233	0.17	-0.7
3,620,240	-		Pf1N1B4_3233	0.17	+1.3
3,620,240	-		Pf1N1B4_3233	0.17	-0.3
3,620,250	+		Pf1N1B4_3233	0.18	-1.0
3,620,250	+		Pf1N1B4_3233	0.18	-1.2
3,620,250	+		Pf1N1B4_3233	0.18	-0.0
3,620,250	+		Pf1N1B4_3233	0.18	-1.6
3,620,250	+		Pf1N1B4_3233	0.18	+1.6
3,620,251	-		Pf1N1B4_3233	0.19	-0.0
3,620,251	-		Pf1N1B4_3233	0.19	+0.4
3,620,251	-		Pf1N1B4_3233	0.19	-0.6
3,620,284	+		Pf1N1B4_3233	0.23	-0.0
3,620,455	-		Pf1N1B4_3233	0.45	-0.4
3,620,455	-		Pf1N1B4_3233	0.45	+0.7
3,620,524	+		Pf1N1B4_3233	0.54	+0.3
3,620,525	-		Pf1N1B4_3233	0.54	-2.3
3,620,897	+				-0.3
3,620,897	+				-1.3
3,620,897	+				-1.6
3,620,897	+				+0.7
3,620,897	+				-0.3
3,620,897	+				-0.0
3,620,897	+				-0.9
3,620,897	+				+1.3
3,620,898	-				+0.6
3,620,898	-				+0.3
3,620,898	-				-1.6
3,620,898	-				-1.6
3,620,899	+				-0.6
3,620,899	+				-0.1
3,620,899	+				+1.8
3,620,899	+				+0.2
3,620,899	+				-1.0
3,620,899	+				-1.6
3,620,900	-				+0.7
3,620,900	-				+1.3
3,620,900	-				-0.0
3,621,084	+		Pf1N1B4_3234	0.17	+1.3
3,621,084	+		Pf1N1B4_3234	0.17	+1.0
3,621,084	+		Pf1N1B4_3234	0.17	+1.0
3,621,085	-		Pf1N1B4_3234	0.17	+1.0